Detailed information NTG0317107

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: D7D50_RS00925
• Genome accession: NZ_CP032620
• Coordinates: 164400..165323 (-)
• Length: 307 a.a.
• NCBI ID: WP_120701229.1
• Uniprot ID: -
• Organism: Streptococcus koreensis strain KCOM 2890 (=JS71)
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 159400..170323

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D7D50_RS00925 (D7D50_00925)	amiF	164400..165323 (-)	924	WP_120701229.1	ATP-binding cassette domain-containing protein	Regulator
D7D50_RS00930 (D7D50_00930)	amiE	165333..166400 (-)	1068	WP_120701230.1	ABC transporter ATP-binding protein	Regulator
D7D50_RS00935 (D7D50_00935)	amiD	166412..167338 (-)	927	WP_117745255.1	oligopeptide ABC transporter permease OppC	Regulator
D7D50_RS00940 (D7D50_00940)	amiC	167338..168837 (-)	1500	WP_120701231.1	ABC transporter permease	Regulator

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34852.96 Da
• Isoelectric Point: 5.9031

>NTDB_id=317107 D7D50_RS00925 WP_120701229.1 164400..165323(-) (amiF) [Streptococcus koreensis strain KCOM 2890 (=JS71)]
MTEKLIEVKDLEISFGEGSKKFVAVKNANFFINKGETFSLVGESGSGKTTIGRAIIGLNDTSAGDILYDGKKINGKQTRK
DENELIRKIQMIFQDPAASLNERATVDYIISEGLYNYHLFEDEEDRVRKVKEIMHEVGLLAEHLTRYPHEFSGGQRQRIG
IARALVMEPEFVIADEPISALDVSVRAQVLNLLKKFQKDLGLTYLFIAHDLSVVRFISDRIAVIYKGVIVEVAETEELFN
NPIHPYTQSLLSAVPIPDPILERKKVLKVYDPDQHDYSTDKPEMVEIKPGHYVWANKAEQKKYKELV

Nucleotide

• Length: 924 bp

>NTDB_id=317107 D7D50_RS00925 WP_120701229.1 164400..165323(-) (amiF) [Streptococcus koreensis strain KCOM 2890 (=JS71)]
ATGACAGAAAAATTAATAGAAGTTAAAGATCTAGAAATTTCCTTCGGTGAAGGAAGTAAAAAATTTGTAGCTGTAAAGAA
TGCAAATTTCTTCATCAATAAAGGGGAAACATTTTCCCTCGTTGGTGAGTCAGGTAGTGGGAAGACCACAATTGGTCGAG
CAATCATTGGTTTGAATGACACTAGTGCAGGTGACATCTTATATGATGGTAAAAAGATCAATGGGAAGCAAACTCGCAAG
GATGAAAATGAATTAATCCGAAAGATTCAAATGATTTTCCAAGACCCAGCAGCTAGCTTGAATGAGCGTGCAACCGTCGA
CTATATTATTTCAGAAGGGTTGTACAATTATCACCTCTTCGAAGATGAAGAAGACCGAGTACGTAAAGTAAAAGAAATTA
TGCATGAGGTTGGTCTTCTAGCAGAGCATTTGACTCGTTATCCCCATGAATTCTCTGGTGGACAACGCCAGCGGATTGGT
ATCGCTCGTGCCTTGGTAATGGAGCCAGAATTTGTTATCGCAGATGAACCGATTTCCGCCCTAGACGTATCAGTTCGTGC
ACAAGTATTGAATCTCCTGAAGAAATTCCAGAAAGACTTGGGTTTGACCTATCTCTTTATCGCACATGATCTTTCAGTAG
TTCGTTTTATCTCTGATCGTATTGCGGTTATTTACAAAGGTGTTATTGTAGAAGTAGCTGAAACGGAAGAATTGTTTAAC
AACCCAATTCATCCTTATACCCAATCTCTACTATCTGCAGTTCCGATTCCAGATCCAATTCTAGAACGCAAAAAAGTTCT
GAAAGTTTATGATCCTGATCAGCACGATTATTCAACCGACAAACCAGAAATGGTTGAAATCAAGCCAGGACATTACGTTT
GGGCAAATAAAGCAGAACAGAAAAAATATAAAGAACTTGTATAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

• ABC transporter (ABC_tran) (25-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus salivarius strain HSISS4	84.262	99.349	0.837
amiF	Streptococcus thermophilus LMG 18311	83.934	99.349	0.834
amiF	Streptococcus thermophilus LMD-9	83.607	99.349	0.831