Detailed information NTG0316768

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: E5N77_RS04085
• Genome accession: NZ_CP039123
• Coordinates: 943184..943786 (+)
• Length: 200 a.a.
• NCBI ID: WP_019327305.1
• Uniprot ID: A0ABW1XRL4
• Organism: Streptomyces sp. SS52
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 938184..948786

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E5N77_RS04060 (E5N77_04060)	-	938886..940103 (-)	1218	WP_046249646.1	FAD-dependent monooxygenase	-
E5N77_RS04065 (E5N77_04065)	-	940259..940957 (-)	699	WP_029393756.1	ribonuclease H	-
E5N77_RS04070 (E5N77_04070)	-	941001..941792 (-)	792	WP_136235144.1	VOC family protein	-
E5N77_RS04075 (E5N77_04075)	-	941799..942281 (-)	483	WP_019327307.1	VOC family protein	-
E5N77_RS04080 (E5N77_04080)	clpP	942529..943182 (+)	654	WP_062135757.1	ATP-dependent Clp protease proteolytic subunit	Regulator
E5N77_RS04085 (E5N77_04085)	clpP	943184..943786 (+)	603	WP_019327305.1	ATP-dependent Clp protease proteolytic subunit	Regulator
E5N77_RS04090 (E5N77_04090)	-	943836..944258 (-)	423	WP_109203522.1	helix-turn-helix transcriptional regulator	-
E5N77_RS04095 (E5N77_04095)	-	944506..945393 (+)	888	WP_031021113.1	RNA polymerase sigma factor SigF	-
E5N77_RS04100 (E5N77_04100)	-	945509..945964 (-)	456	WP_019327302.1	ATP-binding protein	-
E5N77_RS04105 (E5N77_04105)	-	946118..946702 (+)	585	WP_136235145.1	PRC-barrel domain-containing protein	-
E5N77_RS04110 (E5N77_04110)	-	946702..947127 (+)	426	WP_136237012.1	PRC-barrel domain-containing protein	-
E5N77_RS04115 (E5N77_04115)	-	947222..948505 (+)	1284	WP_168723629.1	streptophobe family protein	-

Sequence

Protein

• Length: 200 a.a.
• Molecular weight: 21590.57 Da
• Isoelectric Point: 5.2899

>NTDB_id=316768 E5N77_RS04085 WP_019327305.1 943184..943786(+) (clpP) [Streptomyces sp. SS52]
MGSYTIPNVVERTPQGERSYDVFSRLLSERIIFLGTEIDDGVANVVIAQLLHLESSAPESEIAVYINSPGGSFTSLMAIY
DTMTFVQAPISTFCVGQAASTAAVLLAGGDPGRRFVLEHARVLLGQPASGGRQGTVTDLALQAKEMVRIRAQVEEVLARH
TGHDVATLRADMDRDKVFTAREAVAYGLADEVLSRRLARV

Nucleotide

• Length: 603 bp

>NTDB_id=316768 E5N77_RS04085 WP_019327305.1 943184..943786(+) (clpP) [Streptomyces sp. SS52]
ATGGGGAGCTACACGATTCCGAACGTCGTCGAGCGGACCCCGCAGGGCGAGCGGTCCTACGACGTCTTCAGCCGGCTGCT
GTCGGAGCGGATCATCTTCCTCGGCACCGAGATCGACGACGGTGTGGCCAACGTCGTCATCGCCCAGCTCCTGCACCTGG
AGTCCTCGGCTCCCGAGAGCGAGATCGCGGTGTACATCAACTCCCCCGGCGGCTCCTTCACGTCGCTGATGGCGATCTAC
GACACGATGACCTTCGTCCAGGCGCCGATCTCCACGTTCTGCGTCGGGCAGGCCGCCTCCACGGCCGCCGTGCTGCTGGC
CGGCGGCGACCCCGGACGGCGGTTCGTGCTGGAGCACGCCCGGGTGCTGCTCGGCCAGCCGGCCAGCGGCGGCCGTCAGG
GCACAGTCACCGACCTGGCCCTGCAGGCCAAGGAGATGGTGCGGATCCGCGCGCAGGTCGAGGAGGTGCTGGCCCGGCAC
ACCGGGCACGACGTGGCGACGCTGCGCGCCGACATGGACCGCGACAAGGTCTTCACCGCCCGGGAAGCGGTGGCCTACGG
GCTGGCCGACGAGGTGCTCAGCCGGCGGCTGGCGCGGGTGTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (15-195)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	49.206	94.5	0.465
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	46.842	95	0.445
clpP	Streptococcus pneumoniae D39	40.104	96	0.385
clpP	Streptococcus pneumoniae R6	40.104	96	0.385
clpP	Streptococcus pneumoniae TIGR4	40.104	96	0.385
clpP	Streptococcus pneumoniae Rx1	40.104	96	0.385
clpP	Streptococcus pyogenes JRS4	40.104	96	0.385
clpP	Streptococcus pyogenes MGAS315	40.104	96	0.385
clpP	Lactococcus lactis subsp. cremoris KW2	38.66	97	0.375
clpP	Streptococcus thermophilus LMD-9	38.542	96	0.37
clpP	Streptococcus mutans UA159	38.542	96	0.37
clpP	Streptococcus thermophilus LMG 18311	38.542	96	0.37