Detailed information NTG0316767

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: E5N77_RS04080
• Genome accession: NZ_CP039123
• Coordinates: 942529..943182 (+)
• Length: 217 a.a.
• NCBI ID: WP_062135757.1
• Uniprot ID: -
• Organism: Streptomyces sp. SS52
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 937529..948182

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E5N77_RS04055 (E5N77_04055)	-	937840..938823 (-)	984	WP_030976527.1	aldo/keto reductase	-
E5N77_RS04060 (E5N77_04060)	-	938886..940103 (-)	1218	WP_046249646.1	FAD-dependent monooxygenase	-
E5N77_RS04065 (E5N77_04065)	-	940259..940957 (-)	699	WP_029393756.1	ribonuclease H	-
E5N77_RS04070 (E5N77_04070)	-	941001..941792 (-)	792	WP_136235144.1	VOC family protein	-
E5N77_RS04075 (E5N77_04075)	-	941799..942281 (-)	483	WP_019327307.1	VOC family protein	-
E5N77_RS04080 (E5N77_04080)	clpP	942529..943182 (+)	654	WP_062135757.1	ATP-dependent Clp protease proteolytic subunit	Regulator
E5N77_RS04085 (E5N77_04085)	clpP	943184..943786 (+)	603	WP_019327305.1	ATP-dependent Clp protease proteolytic subunit	Regulator
E5N77_RS04090 (E5N77_04090)	-	943836..944258 (-)	423	WP_109203522.1	helix-turn-helix transcriptional regulator	-
E5N77_RS04095 (E5N77_04095)	-	944506..945393 (+)	888	WP_031021113.1	RNA polymerase sigma factor SigF	-
E5N77_RS04100 (E5N77_04100)	-	945509..945964 (-)	456	WP_019327302.1	ATP-binding protein	-
E5N77_RS04105 (E5N77_04105)	-	946118..946702 (+)	585	WP_136235145.1	PRC-barrel domain-containing protein	-
E5N77_RS04110 (E5N77_04110)	-	946702..947127 (+)	426	WP_136237012.1	PRC-barrel domain-containing protein	-

Sequence

Protein

• Length: 217 a.a.
• Molecular weight: 23381.51 Da
• Isoelectric Point: 5.3004

>NTDB_id=316767 E5N77_RS04080 WP_062135757.1 942529..943182(+) (clpP) [Streptomyces sp. SS52]
MSPLTAGPAPATWPRAQEGDTPPSRFDDHLAAQLLAQRIVLLGTQVDEVSANRVCAQLLILSAEDPRADITLCVNSPGGS
VHAGLAIYDTMRLIPNDVSTLAMGFAASMGQFLLSVGTAGKRYALPNARIMMHQPSAGIGGTTADIEIQADNLEFTKRTI
ERITAEHTGQSPETISRDGDRDRWFTAEEAREYGMVDRVVQSLADVRPAAPKRRMGL

Nucleotide

• Length: 654 bp

>NTDB_id=316767 E5N77_RS04080 WP_062135757.1 942529..943182(+) (clpP) [Streptomyces sp. SS52]
ATGTCCCCACTCACCGCCGGTCCCGCCCCGGCCACCTGGCCCCGCGCCCAGGAGGGCGACACCCCTCCCTCCCGGTTCGA
CGACCATCTGGCGGCGCAGCTGCTCGCGCAGCGCATCGTGCTGCTGGGCACGCAGGTCGACGAGGTCTCCGCCAACCGGG
TCTGCGCCCAGCTGCTGATCCTGTCCGCGGAGGACCCGCGCGCCGACATCACGCTGTGCGTCAACAGCCCGGGCGGCTCC
GTGCACGCGGGGCTCGCCATCTACGACACGATGCGGTTGATCCCCAACGACGTGTCGACGCTCGCCATGGGGTTCGCCGC
GAGCATGGGGCAGTTCCTGCTGAGCGTCGGCACGGCGGGCAAGCGCTACGCCCTGCCGAACGCGCGGATCATGATGCACC
AGCCGTCGGCCGGCATCGGCGGCACCACCGCCGACATCGAGATCCAGGCCGACAACCTGGAGTTCACCAAGCGGACCATC
GAACGGATCACCGCCGAGCACACCGGGCAGAGCCCGGAGACGATCTCCCGGGACGGCGACCGGGACCGCTGGTTCACGGC
CGAGGAGGCCAGGGAGTACGGCATGGTGGACCGGGTCGTCCAGTCCCTCGCGGATGTGCGCCCGGCCGCTCCGAAGCGAC
GGATGGGGCTGTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (30-201)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	48.315	82.028	0.396
clpP	Streptococcus pneumoniae Rx1	48.555	79.724	0.387
clpP	Streptococcus pneumoniae D39	48.555	79.724	0.387
clpP	Streptococcus pneumoniae R6	48.555	79.724	0.387
clpP	Streptococcus pneumoniae TIGR4	48.555	79.724	0.387
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	47.399	79.724	0.378
clpP	Lactococcus lactis subsp. cremoris KW2	46.286	80.645	0.373
clpP	Streptococcus pyogenes JRS4	46.286	80.645	0.373
clpP	Streptococcus pyogenes MGAS315	46.286	80.645	0.373
clpP	Streptococcus thermophilus LMG 18311	46.243	79.724	0.369
clpP	Streptococcus thermophilus LMD-9	46.243	79.724	0.369
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	45.714	80.645	0.369