Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   CDG62_RS14475 Genome accession   NZ_CP032286
Coordinates   2403351..2407865 (-) Length   1504 a.a.
NCBI ID   WP_087528514.1    Uniprot ID   -
Organism   Acinetobacter sp. WCHA55     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 2398351..2412865
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CDG62_RS14445 (CDG62_14450) elsL 2399402..2399905 (-) 504 WP_087528519.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  CDG62_RS14450 (CDG62_14455) - 2399905..2400297 (-) 393 WP_087528517.1 YbaN family protein -
  CDG62_RS14455 (CDG62_14460) - 2400395..2401273 (+) 879 WP_087528516.1 DUF1853 family protein -
  CDG62_RS14460 (CDG62_14465) - 2401431..2401571 (+) 141 WP_087010462.1 entericidin A/B family lipoprotein -
  CDG62_RS14465 (CDG62_14470) dapE 2401692..2402825 (+) 1134 WP_026056444.1 succinyl-diaminopimelate desuccinylase -
  CDG62_RS14470 (CDG62_14475) - 2402885..2403346 (-) 462 WP_087528515.1 hypothetical protein -
  CDG62_RS14475 (CDG62_14480) chpA 2403351..2407865 (-) 4515 WP_087528514.1 Hpt domain-containing protein Regulator
  CDG62_RS14480 (CDG62_14485) - 2408030..2410102 (-) 2073 WP_087528512.1 methyl-accepting chemotaxis protein -
  CDG62_RS14485 (CDG62_14490) - 2410153..2410689 (-) 537 WP_004694490.1 chemotaxis protein CheW -
  CDG62_RS14490 (CDG62_14495) - 2410695..2411063 (-) 369 WP_004694491.1 response regulator -
  CDG62_RS14495 (CDG62_14500) pilG 2411091..2411474 (-) 384 WP_004694493.1 twitching motility response regulator PilG Regulator
  CDG62_RS14500 (CDG62_14505) - 2411755..2412393 (+) 639 WP_087528511.1 hypothetical protein -

Sequence


Protein


Download         Length: 1504 a.a.        Molecular weight: 167761.19 Da        Isoelectric Point: 4.3379

>NTDB_id=314748 CDG62_RS14475 WP_087528514.1 2403351..2407865(-) (chpA) [Acinetobacter sp. WCHA55]
MKEILKHLVETTTLPEDSYLDQDAEILEIFVEEIEEIFVELDPLFEKWYAEPTHQETLLSIRRHFHTLKGSGRMVGAKSA
GETAWAVEDTLNRVISGAVPLTATVQKFAKTVFKLFQFKLYPIFKAVQEIDLDLRPLVLIGQQLQQNQSLEPALEDLLQL
SNHLNSDNDVTGLELSDIEVVDSEPQVADAPEQDDQVHDVLEETLAIFIEEAEDHLATIDQFLNADETKVQDYNGLIRAL
HTLRGSSSMAQIEHVFNASSKVENLFKTLVQEEIVSTSKEISLLTQYAEFVRDYLHVLGRGTNEQLDVVYATFTTAWDNY
GFSIEDVDNELNPQGMVSKLIELNIDLLLDAEFEFDQRAKVEYPDYIQHLGEQAKQLLEFTNNRAAQGIHDFTSELYAGY
QALLEKPELLNVDYAYELFGQAHQEFIHLFDTLAAGQRVILTEEVHKALNELIAFVQQDVESTSAMVIEPVAEAIVSGST
SQPSLDLALISQQIASDHQHKQSNTANTDFDDDLLDIFLEEAEELLMGMDQDLNTWSQNGNDPAALNNLMRYLHTLKGGA
NMISAPFIGSIAHELESIYERVIRQQIATTPQLISILRLVQDDVADRIQVIRTEKVDYPATSTINVLHNIQSLVEGTVVT
ISASEPLAETFVAAIEEAQASVEEPLSNVDRIETETETETETETEAEAETAVVESVTAIEASSVVEQLDTPSLAQNEAVS
AVEEAVSLLSIVEETFLEEAEEILATTDGLLKQWTEQRSDRSVLLQLQRAAHSLKGGARMAENEPVGAIAYELETTFEQF
AVHNFSSNMYDPLLQTAFEWLKQAIFKRDFSNYDGLKNSLASIDYVDVIAQLPTRVTQIDLLNAVPSFEFVQGDGTEPPA
MLGEWKETTHLDGGNEMIRISADLVEKMIDLSGENAINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMEGELESQIIA
KHGSENSRYADFDPLEMDQYSSLNQLSKSLAESASDLVDFKSTLAEKIRDAEGLLLQQSRIQAEIQESLMRTRLVPFSRM
LPRLQRIVRQTASTLNRPTELVVHNTEGELDRTILERLVTPFEHMLRNAIDHGIEDAEQRSVAKKSAAGQIELNISRQGT
DVIVSFKDDGKGIDESAIKAKALNLGLIKVDQVLDKQEILQFIFHPGFSTAKEVTQISGRGVGLDVVQSEIKALGGHVTV
ESEIGLGTTFIIRVPTTVAVSDALMVKAGDQQYAIPLAQIDRIVRIAPTALDQYFHSKDDQFKIDGVSYKLRYLSEFLSN
QPIPRLSNIGHSLPVLLIKGNSGQTIALLVDQLIGSRAQIVVKPVGQQFASIGAIAGATILGDGHVCLILDGQNIARQIL
STKRVTHAADHRDFGRHQDTRRLVMIVDDSVTVRKVTSRLLERQGFDIVTAKDGVDAMEQLESVKPDLMLLDIEMPRMDG
FEVTNLVRHHEIHQNLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIQQLLAEKQG

Nucleotide


Download         Length: 4515 bp        

>NTDB_id=314748 CDG62_RS14475 WP_087528514.1 2403351..2407865(-) (chpA) [Acinetobacter sp. WCHA55]
ATGAAAGAAATATTAAAACATTTAGTTGAAACGACAACGCTTCCGGAAGATAGTTATCTAGATCAAGATGCAGAAATTCT
TGAAATTTTTGTTGAAGAAATTGAAGAAATCTTCGTTGAGTTAGATCCATTATTTGAAAAGTGGTACGCTGAACCGACAC
ATCAAGAAACATTGTTGAGCATACGTCGTCACTTCCATACCTTAAAAGGTTCTGGTCGTATGGTGGGGGCAAAGTCAGCA
GGTGAAACAGCGTGGGCAGTTGAAGACACTTTAAATCGTGTGATTTCAGGGGCTGTACCGCTTACAGCAACGGTCCAAAA
ATTTGCTAAAACAGTATTCAAACTGTTTCAATTTAAACTGTATCCGATATTCAAAGCGGTACAGGAAATTGATCTTGACC
TTCGTCCACTGGTGTTAATTGGACAACAATTACAACAAAATCAAAGTTTAGAACCTGCACTAGAAGATTTGCTACAACTG
TCTAATCATCTAAATAGTGATAATGATGTGACAGGATTAGAGCTGAGTGATATCGAGGTTGTTGATTCTGAGCCACAAGT
TGCAGATGCTCCTGAACAGGATGATCAAGTGCATGATGTTCTAGAAGAAACTTTAGCGATCTTTATTGAAGAGGCGGAAG
ATCATTTAGCGACTATTGATCAGTTCCTAAATGCAGATGAAACCAAAGTACAAGATTACAATGGCTTAATCCGTGCTTTA
CATACACTGCGCGGTAGTTCGTCTATGGCGCAAATTGAGCATGTTTTTAATGCCAGCTCAAAAGTCGAAAATCTATTTAA
AACCTTGGTTCAAGAAGAGATCGTTTCTACCTCGAAGGAAATCTCTTTACTCACCCAATATGCTGAATTTGTACGTGACT
ATTTACACGTGCTTGGGCGAGGTACGAACGAACAGCTTGACGTGGTTTACGCCACGTTCACTACGGCTTGGGATAATTAT
GGTTTCAGTATTGAAGACGTAGATAATGAGCTAAACCCACAAGGTATGGTTTCTAAGCTGATTGAGTTAAATATTGATCT
GTTGCTTGATGCTGAGTTTGAGTTTGATCAGCGGGCTAAAGTTGAATATCCAGACTATATTCAGCACTTAGGTGAACAAG
CAAAACAATTACTGGAATTCACCAATAACCGTGCTGCTCAAGGAATTCATGACTTTACTTCTGAGCTGTATGCTGGTTAT
CAGGCCTTATTGGAAAAGCCGGAATTACTCAATGTAGATTATGCATACGAGTTATTTGGTCAGGCACATCAAGAATTTAT
CCATTTATTTGATACTTTAGCTGCTGGTCAGCGCGTCATTCTGACTGAAGAAGTGCATAAAGCTCTCAATGAATTAATTG
CTTTCGTACAGCAAGATGTTGAATCGACTTCGGCAATGGTAATTGAACCTGTCGCTGAGGCTATTGTTTCTGGAAGTACT
TCACAACCAAGCCTTGATCTTGCACTGATTTCGCAGCAAATTGCATCGGATCATCAGCACAAGCAATCGAATACGGCCAA
CACCGATTTTGATGATGATTTGCTTGATATCTTCTTAGAAGAAGCCGAAGAATTATTAATGGGGATGGATCAGGATCTTA
ATACTTGGTCTCAAAATGGCAATGATCCAGCAGCACTCAATAATTTAATGCGTTATTTGCACACCTTAAAAGGTGGTGCA
AATATGATTTCTGCACCTTTTATTGGTTCGATTGCACACGAATTAGAGTCTATTTATGAGCGTGTGATTCGTCAGCAAAT
AGCCACAACGCCACAGTTGATCAGCATCTTACGCTTAGTACAGGATGACGTCGCAGACCGAATTCAGGTCATTCGTACGG
AGAAGGTTGATTATCCAGCAACATCGACCATCAATGTACTGCATAACATTCAGAGCCTAGTAGAGGGTACGGTTGTTACA
ATTTCTGCATCTGAGCCATTGGCTGAGACGTTTGTTGCCGCAATTGAAGAGGCTCAGGCTTCAGTTGAAGAACCTTTATC
TAATGTAGATAGAATAGAAACAGAAACAGAAACAGAAACAGAAACAGAAACAGAAGCAGAAGCAGAAACAGCTGTTGTTG
AGTCAGTAACTGCAATTGAAGCGTCGAGTGTAGTTGAACAGCTGGATACTCCGTCACTTGCACAAAACGAAGCAGTCAGC
GCTGTTGAAGAAGCAGTTAGTCTTTTATCAATCGTTGAAGAAACCTTTTTGGAAGAAGCTGAAGAGATTTTAGCAACTAC
GGATGGCTTACTGAAACAGTGGACTGAACAACGTAGTGACCGTAGTGTGTTACTGCAATTGCAACGTGCTGCGCATAGCT
TAAAAGGCGGCGCGCGCATGGCGGAGAATGAACCTGTTGGTGCGATTGCTTATGAGCTAGAAACTACATTTGAGCAATTT
GCTGTACATAATTTCAGTTCAAACATGTATGACCCTTTATTGCAAACCGCATTTGAATGGTTAAAACAAGCTATCTTCAA
ACGTGATTTTAGTAATTATGATGGTCTAAAAAACAGCTTAGCATCTATTGACTATGTGGATGTGATTGCACAATTACCAA
CGCGTGTAACACAAATTGATTTACTCAATGCGGTACCAAGTTTTGAGTTTGTACAGGGTGATGGTACTGAGCCGCCAGCA
ATGCTGGGTGAGTGGAAAGAAACGACTCACTTGGATGGTGGTAATGAGATGATCCGTATCTCAGCTGATTTGGTTGAGAA
AATGATCGACCTGTCAGGTGAAAATGCGATTAACCGTTCGCGTATCGAGATGGACTTAGGTCAGCTCGGCAATACGTTGA
ACGAGATGGAGCTTGCAATTAAGCGTTTGGCGGATCAGTTACGTCGAATGGAAGGCGAGCTTGAGAGTCAAATTATTGCG
AAGCATGGTTCTGAAAACTCGCGCTACGCAGACTTTGACCCCTTGGAAATGGACCAATATTCATCGCTGAATCAATTGTC
TAAATCCTTAGCCGAATCAGCTTCGGATTTGGTTGACTTCAAGAGCACTTTGGCAGAGAAGATTCGTGATGCGGAAGGCT
TGTTATTACAACAATCCCGTATTCAAGCGGAAATTCAAGAAAGCTTAATGCGGACACGTTTGGTGCCGTTCTCACGTATG
TTACCTCGTTTACAGCGTATTGTACGTCAGACCGCATCAACCTTGAATCGTCCAACGGAACTGGTCGTCCACAATACTGA
AGGTGAGTTGGACCGTACGATTCTTGAACGTTTGGTTACACCGTTTGAGCATATGCTACGTAATGCAATCGACCACGGTA
TTGAAGATGCGGAACAACGTAGCGTTGCGAAAAAATCAGCGGCAGGCCAAATTGAGCTGAACATTAGCCGTCAAGGTACA
GATGTGATTGTCAGCTTTAAAGATGATGGTAAGGGTATTGATGAAAGCGCAATTAAAGCGAAAGCGCTAAACTTAGGTTT
AATTAAAGTCGATCAAGTGCTGGATAAACAGGAAATCTTACAGTTTATTTTCCATCCAGGTTTCAGTACAGCCAAAGAAG
TGACGCAAATTTCTGGACGTGGTGTCGGTCTTGATGTGGTGCAAAGTGAAATTAAAGCACTGGGTGGACATGTCACGGTT
GAATCGGAAATTGGACTCGGCACGACATTCATTATTCGTGTACCGACTACGGTAGCGGTGAGTGATGCCTTGATGGTAAA
AGCAGGCGATCAACAATATGCAATTCCATTGGCACAGATTGATCGTATTGTGCGTATTGCTCCAACAGCATTGGATCAGT
ATTTCCACAGTAAAGATGACCAATTCAAAATTGATGGTGTAAGTTATAAACTACGCTATCTATCTGAGTTTTTATCTAAT
CAGCCGATTCCACGTTTGAGTAATATTGGACATTCATTGCCAGTGTTGTTGATTAAAGGCAATAGCGGACAAACCATTGC
GTTATTAGTCGATCAGCTTATTGGTTCTCGTGCGCAAATTGTAGTGAAGCCAGTTGGGCAACAGTTTGCCAGTATTGGTG
CAATTGCGGGCGCAACGATCTTGGGTGATGGTCATGTGTGCTTGATTTTAGATGGTCAGAACATTGCACGTCAGATTTTA
AGTACCAAGCGTGTGACGCATGCAGCCGATCACCGTGACTTTGGTCGTCATCAGGATACGCGTCGTTTAGTGATGATTGT
GGATGACTCGGTTACGGTACGTAAGGTCACATCGCGCTTATTAGAGCGTCAAGGCTTTGATATTGTGACTGCTAAAGACG
GTGTCGATGCGATGGAGCAGCTTGAGAGCGTTAAACCAGACTTGATGTTGCTGGATATTGAAATGCCACGTATGGATGGT
TTTGAAGTAACGAACTTGGTTCGTCACCACGAAATTCACCAGAATCTGCCGATTATTATGATTACATCGCGTACGGGTGA
AAAACACCGTGAACGTGCTTTCAGCTTGGGTGTGACACACTATATGGGCAAACCATTCCAAGAGGCAGAATTACTTGCCA
ACATTCAGCAGTTATTGGCTGAAAAGCAGGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.63

100

0.614


Multiple sequence alignment