Detailed information
Bioinformatically predicted
Overview
| Name | comGG | Type | Machinery gene |
| Locus tag | LL1196_RS12105 | Genome accession | NZ_CP032148 |
| Coordinates | 2312711..2313010 (-) | Length | 99 a.a. |
| NCBI ID | WP_011677181.1 | Uniprot ID | A0AA47KWG7 |
| Organism | Lactococcus cremoris strain 1196 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2307711..2318010
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LL1196_RS12085 (LL1196_2422) | - | 2309637..2310446 (-) | 810 | WP_011677177.1 | metal ABC transporter permease | - |
| LL1196_RS12090 (LL1196_2423) | - | 2310439..2311176 (-) | 738 | WP_011677178.1 | metal ABC transporter ATP-binding protein | - |
| LL1196_RS12095 (LL1196_2424) | - | 2311355..2312197 (-) | 843 | WP_021216263.1 | metal ABC transporter solute-binding protein, Zn/Mn family | - |
| LL1196_RS12100 (LL1196_2425) | - | 2312194..2312631 (-) | 438 | WP_011677180.1 | zinc-dependent MarR family transcriptional regulator | - |
| LL1196_RS12105 (LL1196_03775) | comGG | 2312711..2313010 (-) | 300 | WP_011677181.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| LL1196_RS12110 (LL1196_2426) | comGF | 2313034..2313459 (-) | 426 | WP_021216262.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| LL1196_RS12115 (LL1196_2427) | comGE | 2313443..2313739 (-) | 297 | WP_021164977.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| LL1196_RS12120 (LL1196_03780) | comGD | 2313711..2313899 (-) | 189 | WP_014573336.1 | hypothetical protein | Machinery gene |
| LL1196_RS12125 (LL1196_2428) | comGC | 2314101..2314451 (-) | 351 | WP_050574401.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| LL1196_RS12130 (LL1196_2429) | comGB | 2314496..2315521 (-) | 1026 | WP_050574400.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| LL1196_RS12135 (LL1196_2430) | - | 2315421..2316242 (-) | 822 | Protein_2361 | ATPase, T2SS/T4P/T4SS family | - |
| LL1196_RS12140 (LL1196_2431) | - | 2316345..2317235 (+) | 891 | WP_205536422.1 | IS982 family transposase | - |
| LL1196_RS12145 (LL1196_2432) | comGA | 2317217..2317408 (-) | 192 | WP_014573341.1 | hypothetical protein | Machinery gene |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11240.23 Da Isoelectric Point: 9.5415
>NTDB_id=314099 LL1196_RS12105 WP_011677181.1 2312711..2313010(-) (comGG) [Lactococcus cremoris strain 1196]
MVLLLIFSLFLQFYLQKQVLTAQQLKIEKERLTAELMVSLALKKDLKTSGQLNFDCGNLTYKLLTDLSADSTSGGQTVSN
KTYCFDVRLKDGRIFQIVK
MVLLLIFSLFLQFYLQKQVLTAQQLKIEKERLTAELMVSLALKKDLKTSGQLNFDCGNLTYKLLTDLSADSTSGGQTVSN
KTYCFDVRLKDGRIFQIVK
Nucleotide
Download Length: 300 bp
>NTDB_id=314099 LL1196_RS12105 WP_011677181.1 2312711..2313010(-) (comGG) [Lactococcus cremoris strain 1196]
TTGGTTTTACTGCTAATTTTTTCTTTATTTCTACAGTTTTATTTGCAAAAACAGGTGCTTACAGCTCAGCAATTGAAAAT
AGAAAAGGAGCGACTGACAGCCGAATTAATGGTTTCATTGGCTCTTAAAAAGGATTTGAAAACGAGTGGTCAACTTAATT
TTGATTGTGGAAATTTAACTTACAAATTACTGACAGATCTGTCAGCTGATTCAACTAGCGGTGGTCAAACTGTTAGTAAT
AAAACTTATTGTTTTGATGTTCGGCTTAAGGATGGAAGAATTTTTCAAATAGTAAAGTAA
TTGGTTTTACTGCTAATTTTTTCTTTATTTCTACAGTTTTATTTGCAAAAACAGGTGCTTACAGCTCAGCAATTGAAAAT
AGAAAAGGAGCGACTGACAGCCGAATTAATGGTTTCATTGGCTCTTAAAAAGGATTTGAAAACGAGTGGTCAACTTAATT
TTGATTGTGGAAATTTAACTTACAAATTACTGACAGATCTGTCAGCTGATTCAACTAGCGGTGGTCAAACTGTTAGTAAT
AAAACTTATTGTTTTGATGTTCGGCTTAAGGATGGAAGAATTTTTCAAATAGTAAAGTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGG | Lactococcus lactis subsp. cremoris KW2 |
98.99 |
100 |
0.99 |