Detailed information NTG0314080

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LL1196_RS06735
• Genome accession: NZ_CP032148
• Coordinates: 1321983..1322831 (+)
• Length: 282 a.a.
• NCBI ID: WP_011676300.1
• Uniprot ID: A0A896TAG0
• Organism: Lactococcus cremoris strain 1196
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1316983..1327831

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LL1196_RS06710 (LL1196_1377)	-	1317694..1318227 (+)	534	WP_021212611.1	hypothetical protein	-
LL1196_RS06715 (LL1196_1378)	-	1318276..1319166 (-)	891	WP_205536332.1	IS982-like element ISLll1 family transposase	-
LL1196_RS06720 (LL1196_1379)	ilvA	1319320..1320570 (+)	1251	WP_021215495.1	threonine ammonia-lyase IlvA	-
LL1196_RS06725 (LL1196_1380)	budA	1320705..1321415 (+)	711	WP_011676302.1	acetolactate decarboxylase	-
LL1196_RS06730 (LL1196_1381)	-	1321455..1321835 (+)	381	WP_014572603.1	RidA family protein	-
LL1196_RS06735 (LL1196_1382)	dprA	1321983..1322831 (+)	849	WP_011676300.1	DNA-processing protein DprA	Machinery gene
LL1196_RS06740 (LL1196_1383)	topA	1323097..1325223 (+)	2127	WP_014572601.1	type I DNA topoisomerase	-
LL1196_RS06745 (LL1196_1384)	trmFO	1325295..1326641 (+)	1347	WP_014572600.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
LL1196_RS06750 (LL1196_1385)	xerS	1326691..1327761 (-)	1071	WP_014572599.1	tyrosine recombinase XerS	-

Sequence

Protein

• Length: 282 a.a.
• Molecular weight: 31955.09 Da
• Isoelectric Point: 9.8385

>NTDB_id=314080 LL1196_RS06735 WP_011676300.1 1321983..1322831(+) (dprA) [Lactococcus cremoris strain 1196]
MITNFDLFRWKKAGMTNLGVNKLLKFFRKYDIKISLRQMGQVAQVKSIPNFIEQYKNQDVKKLRIDYKKFSSFSILDDLY
PERLREIYNPPVLIFYQGNIDLLKNPKLAFVGSRLAGQSGIKAVQKIITELNQSFTIVSGLAKGIDTASHLSAIKTKTPT
IAVIGTGLDIFYPLENRKIQEYLAKNQLVLSEYSLGEKPLKYHFPERNRIIAGLSRGVVVVEEKLRSGSLITCERALEEG
RDIFAIPGNIADGTSDGCNHLIQQGAKLVYQAQDILEEYLYN

Nucleotide

• Length: 849 bp

>NTDB_id=314080 LL1196_RS06735 WP_011676300.1 1321983..1322831(+) (dprA) [Lactococcus cremoris strain 1196]
ATGATTACAAATTTTGATTTATTTCGTTGGAAAAAAGCAGGAATGACCAATCTTGGTGTAAATAAGCTCTTAAAATTTTT
CCGCAAATATGATATAAAAATAAGCTTACGACAAATGGGACAAGTGGCTCAAGTCAAATCAATCCCTAACTTTATCGAAC
AATATAAAAATCAGGACGTAAAGAAACTCAGGATAGACTATAAAAAATTTTCCTCCTTTTCCATTCTTGATGACCTTTAT
CCCGAGCGTCTAAGAGAAATCTACAACCCACCCGTTTTAATTTTTTATCAGGGAAATATTGATTTATTAAAAAATCCTAA
ACTTGCCTTTGTTGGAAGCCGCCTAGCAGGTCAATCAGGGATAAAAGCTGTCCAAAAAATTATCACAGAATTGAATCAAT
CCTTTACAATAGTAAGCGGGCTTGCTAAAGGGATTGACACAGCCAGCCATCTGTCAGCAATTAAAACTAAAACACCAACA
ATTGCTGTTATTGGTACAGGATTGGATATTTTCTATCCACTAGAAAATCGTAAAATACAGGAATATCTAGCAAAAAATCA
ATTAGTTTTAAGTGAATATTCATTAGGCGAAAAACCACTTAAATACCACTTTCCAGAGCGCAATCGAATTATTGCTGGTC
TTTCACGGGGAGTTGTTGTCGTGGAAGAAAAATTAAGAAGTGGCAGTTTAATCACCTGTGAAAGAGCACTGGAAGAAGGA
CGAGATATCTTTGCCATCCCTGGAAATATTGCAGATGGAACATCTGATGGCTGTAATCATCTTATTCAACAAGGAGCAAA
ACTTGTCTATCAAGCTCAAGATATTTTAGAAGAATATTTGTACAATTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (69-270)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	97.872	100	0.979
dprA	Streptococcus mutans UA159	58.993	98.582	0.582
dprA/cilB/dalA	Streptococcus mitis SK321	55.714	99.291	0.553
dprA/cilB/dalA	Streptococcus pneumoniae R6	55.357	99.291	0.55
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	55.357	99.291	0.55
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	55.357	99.291	0.55
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	55.357	99.291	0.55
dprA/cilB/dalA	Streptococcus pneumoniae D39	55.357	99.291	0.55
dprA	Bacillus subtilis subsp. subtilis str. 168	39.273	97.518	0.383
dprA	Vibrio campbellii strain DS40M4	35.314	100	0.379
dprA	Legionella pneumophila strain ERS1305867	38.768	97.872	0.379
dprA	Haemophilus influenzae Rd KW20	39.259	95.745	0.376