Detailed information NTG0310391

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: ES298_RS09730
• Genome accession: NZ_CP038253
• Coordinates: 1887471..1888370 (-)
• Length: 299 a.a.
• NCBI ID: WP_000904833.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901929
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1882471..1893370

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ES298_RS09705 (ES298_10235)	rsmA	1882801..1883673 (-)	873	WP_001216856.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
ES298_RS09710 (ES298_10240)	-	1883804..1884112 (-)	309	WP_000333257.1	hypothetical protein	-
ES298_RS09715 (ES298_10245)	-	1884105..1884746 (-)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
ES298_RS09720 (ES298_10250)	-	1884748..1886778 (-)	2031	WP_000825257.1	bacteriocin-associated integral membrane family protein	-
ES298_RS09725 (ES298_10255)	-	1886855..1887151 (-)	297	WP_000815392.1	lactococcin 972 family bacteriocin	-
ES298_RS09730 (ES298_10260)	comR	1887471..1888370 (-)	900	WP_000904833.1	helix-turn-helix transcriptional regulator	Regulator
ES298_RS09735 (ES298_10265)	rnmV	1888442..1889002 (-)	561	WP_000664448.1	ribonuclease M5	-
ES298_RS09740 (ES298_10270)	-	1889002..1889775 (-)	774	WP_000575638.1	TatD family hydrolase	-
ES298_RS09745 (ES298_10280)	-	1890080..1891051 (-)	972	Protein_1930	DUF1542 domain-containing protein	-
ES298_RS09750 (ES298_10290)	rpmH	1891257..1891391 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
ES298_RS09755 (ES298_10295)	-	1891536..1892750 (-)	1215	WP_000666469.1	pyridoxal phosphate-dependent aminotransferase	-
ES298_RS09760 (ES298_10300)	-	1892906..1893200 (-)	295	Protein_1933	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35335.16 Da
• Isoelectric Point: 4.8989

>NTDB_id=310391 ES298_RS09730 WP_000904833.1 1887471..1888370(-) (comR) [Streptococcus pneumoniae strain TVO_1901929]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLAYIARRLGVPVYSLMPDFSALPSAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMPQIIEKEAYSINDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTQIENYFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALRVERDFSLAESFYQSSKTFAKLIGDEFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=310391 ES298_RS09730 WP_000904833.1 1887471..1888370(-) (comR) [Streptococcus pneumoniae strain TVO_1901929]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGCCTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTTCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGCCTCAGATTATAGAAAAAGAAGCTTATTCAATAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAGAAGGTAACTCAAATAGAGAATTACTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGTAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGAAGCTAATTGGAGATGAATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	37.755	98.328	0.371
comR	Streptococcus suis P1/7	38.144	97.324	0.371
comR	Streptococcus suis 05ZYH33	38.144	97.324	0.371
comR	Streptococcus suis D9	36.12	100	0.361