Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   E3C75_RS04860 Genome accession   NZ_CP038020
Coordinates   920209..921015 (+) Length   268 a.a.
NCBI ID   WP_084825815.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain ATCC 19258     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 915209..926015
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3C75_RS04840 tuf 916258..917454 (+) 1197 WP_084825811.1 elongation factor Tu -
  E3C75_RS04845 tpiA 917703..918461 (+) 759 WP_084825812.1 triose-phosphate isomerase -
  E3C75_RS04850 tmk 918699..919328 (+) 630 WP_002946312.1 dTMP kinase -
  E3C75_RS04855 - 919337..920212 (+) 876 WP_084825814.1 DNA polymerase III subunit delta' -
  E3C75_RS04860 yaaT 920209..921015 (+) 807 WP_084825815.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  E3C75_RS04865 yabA 921002..921322 (+) 321 WP_002946304.1 DNA replication initiation control protein YabA -
  E3C75_RS04870 rsmI 921325..922191 (+) 867 WP_002949974.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  E3C75_RS04875 - 922248..923497 (-) 1250 Protein_914 ISL3 family transposase -
  E3C75_RS04880 - 923758..924993 (+) 1236 WP_100262222.1 ammonium transporter -
  E3C75_RS04885 - 925004..925345 (+) 342 WP_084828553.1 P-II family nitrogen regulator -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29706.04 Da        Isoelectric Point: 4.6456

>NTDB_id=309231 E3C75_RS04860 WP_084825815.1 920209..921015(+) (yaaT) [Streptococcus thermophilus strain ATCC 19258]
MTEVIGIKFEETGAVEYVVPDKNYAKDDFVVVLEKKDKRLAQVVMENTDFPEVSLPADLNRVEGLAGEKDFARYDENLLK
AEKSMGVVADLIAQNQLDMRVVDIVFPLNSSYVRISFVAEKRVDFRQLLKDLATYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRDSKASYPDLGDEIETKDGTGQVVAIDVI
AGTVKVMFEKGGAPLTYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=309231 E3C75_RS04860 WP_084825815.1 920209..921015(+) (yaaT) [Streptococcus thermophilus strain ATCC 19258]
ATGACAGAAGTCATTGGAATAAAATTTGAAGAAACTGGAGCAGTAGAATACGTTGTTCCTGATAAAAATTACGCCAAAGA
TGACTTTGTAGTCGTTTTGGAGAAAAAAGATAAGCGCCTAGCCCAGGTTGTCATGGAGAACACAGATTTTCCTGAGGTTA
GTTTGCCTGCGGATTTGAATCGGGTTGAAGGATTGGCAGGAGAGAAAGATTTTGCTAGATATGATGAAAATCTTTTGAAG
GCTGAAAAGAGTATGGGAGTAGTGGCTGATTTAATTGCTCAAAATCAGCTTGATATGAGGGTGGTGGATATTGTCTTTCC
CCTAAATAGCTCATACGTGCGTATCAGTTTTGTGGCTGAAAAGCGGGTAGATTTTCGTCAGTTGCTCAAGGATTTGGCGA
CTTACTTTAAGACACGTATTGAGTTACGTCAGATTTCAAGTCGTGAGGAATCAAAAATCTATGGTGGCTTAGGACCTTGT
GGTCGGGCACTTTGTTGTTCTAGTTTTTTGGGTGAATTCCCACCAGTATCGATTAAGATGGCTAAAAATCAGAGTTTATC
TTTGAATTCTGGTAAGATGAATGGGGTCTGTGGTCGACTTATGTGTTGTCTCAGTTATGAAGATGACTTTTACCGAGATA
GCAAGGCAAGTTATCCTGACTTGGGTGATGAAATTGAAACCAAGGATGGCACGGGTCAGGTCGTTGCCATTGATGTGATT
GCAGGGACTGTTAAAGTTATGTTTGAAAAAGGGGGAGCTCCCCTAACTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

41.573

99.627

0.414

Multiple sequence alignment