Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   DZS39_RS04340 Genome accession   NZ_CP031628
Coordinates   846914..847102 (+) Length   62 a.a.
NCBI ID   WP_011054546.1    Uniprot ID   A0A5S4TJS4
Organism   Streptococcus pyogenes strain MGAS28330     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 841914..852102
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DZS39_RS04315 (DZS39_04315) - 841986..843194 (+) 1209 WP_012560948.1 glucosaminidase domain-containing protein -
  DZS39_RS04320 (DZS39_04320) - 843334..843858 (+) 525 WP_012560947.1 type II toxin-antitoxin system antitoxin SocA domain-containing protein -
  DZS39_RS04325 (DZS39_04325) - 843846..844712 (+) 867 WP_011054729.1 DUF334 domain-containing protein -
  DZS39_RS04330 (DZS39_04330) spem 845016..845729 (+) 714 WP_014635497.1 streptococcal pyrogenic exotoxin SpeM -
  DZS39_RS04335 (DZS39_04335) spel 846011..846799 (+) 789 WP_021340779.1 streptococcal pyrogenic exotoxin SpeL -
  DZS39_RS04340 (DZS39_04340) prx 846914..847102 (+) 189 WP_011054546.1 hypothetical protein Regulator
  DZS39_RS04350 (DZS39_04350) - 847693..848307 (+) 615 WP_002989607.1 TVP38/TMEM64 family protein -
  DZS39_RS04355 (DZS39_04355) - 848434..849219 (-) 786 WP_002984433.1 hypothetical protein -
  DZS39_RS04360 (DZS39_04360) - 849229..849927 (-) 699 WP_002984437.1 ABC transporter ATP-binding protein -
  DZS39_RS04365 (DZS39_04365) - 849927..850298 (-) 372 WP_002989617.1 GntR family transcriptional regulator -

Sequence


Protein


Download         Length: 62 a.a.        Molecular weight: 7226.17 Da        Isoelectric Point: 3.9947

>NTDB_id=308582 DZS39_RS04340 WP_011054546.1 846914..847102(+) (prx) [Streptococcus pyogenes strain MGAS28330]
MLTYDEFKQAIDDGYIVGDTVMIVRKNGQIFDYVLPHEEARNGEVVTEEKVEEVMVELDYIK

Nucleotide


Download         Length: 189 bp        

>NTDB_id=308582 DZS39_RS04340 WP_011054546.1 846914..847102(+) (prx) [Streptococcus pyogenes strain MGAS28330]
ATGCTAACATACGACGAATTTAAGCAAGCTATTGATGACGGATATATCGTAGGAGACACAGTTATGATCGTGCGTAAAAA
CGGACAGATTTTTGATTATGTGTTGCCGCATGAGGAAGCGAGAAATGGAGAAGTTGTGACAGAGGAGAAGGTGGAAGAAG
TGATGGTGGAATTAGACTATATCAAATGA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

100

100

1

  prx Streptococcus pyogenes MGAS315

84.746

95.161

0.806

  prx Streptococcus pyogenes MGAS8232

84.483

93.548

0.79

  prx Streptococcus pyogenes MGAS315

82.759

93.548

0.774

  prx Streptococcus pyogenes MGAS315

77.966

95.161

0.742

  prx Streptococcus pyogenes MGAS315

87.805

66.129

0.581

  prx Streptococcus pyogenes MGAS315

76.19

67.742

0.516


Multiple sequence alignment