Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | EZV63_RS02745 | Genome accession | NZ_CP036534 |
| Coordinates | 674949..675551 (+) | Length | 200 a.a. |
| NCBI ID | WP_037762288.1 | Uniprot ID | A0ABS7W7I5 |
| Organism | Streptomyces sp. VN1 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 669949..680551
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EZV63_RS02715 (EZV63_02770) | - | 670130..670474 (+) | 345 | WP_070387401.1 | hypothetical protein | - |
| EZV63_RS02720 (EZV63_02775) | - | 670517..671500 (-) | 984 | WP_166623551.1 | aldo/keto reductase | - |
| EZV63_RS02725 (EZV63_02780) | - | 671505..672725 (-) | 1221 | WP_166623552.1 | FAD-dependent monooxygenase | - |
| EZV63_RS02730 (EZV63_02785) | - | 672815..673516 (-) | 702 | WP_070387402.1 | ribonuclease H | - |
| EZV63_RS02735 (EZV63_02790) | - | 673556..674038 (-) | 483 | WP_037762290.1 | VOC family protein | - |
| EZV63_RS02740 (EZV63_02795) | clpP | 674294..674947 (+) | 654 | WP_031029055.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| EZV63_RS02745 (EZV63_02800) | clpP | 674949..675551 (+) | 603 | WP_037762288.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| EZV63_RS02750 (EZV63_02805) | - | 675607..676050 (-) | 444 | WP_070387403.1 | helix-turn-helix transcriptional regulator | - |
| EZV63_RS02755 (EZV63_02810) | - | 676239..677136 (+) | 898 | Protein_518 | RNA polymerase sigma factor SigF | - |
| EZV63_RS02760 (EZV63_02815) | - | 677201..677656 (-) | 456 | WP_031029060.1 | ATP-binding protein | - |
| EZV63_RS02765 (EZV63_02820) | - | 677802..678386 (+) | 585 | WP_037762280.1 | PRC-barrel domain-containing protein | - |
| EZV63_RS02770 (EZV63_02825) | - | 678383..678799 (+) | 417 | WP_166623553.1 | hypothetical protein | - |
| EZV63_RS02775 (EZV63_02830) | - | 678946..680274 (+) | 1329 | WP_267470014.1 | streptophobe family protein | - |
Sequence
Protein
Download Length: 200 a.a. Molecular weight: 21646.59 Da Isoelectric Point: 5.0497
>NTDB_id=308319 EZV63_RS02745 WP_037762288.1 674949..675551(+) (clpP) [Streptomyces sp. VN1]
MSGYTIPNVVQRTPQGERSYDVFSRLLSERIIFLGTEIDDGVANVVIAQLLHLESSAPESEIAVYINSPGGSFTSLMAIY
DTMTFVQAPISTFCVGQAASTAAVLLAGGDPGRRFVLEHARVLLGQPASGGRRGTISDLALEAKEMVRIRAQVEEVLARH
THHDVATLRTDMDRDKVFTAEEAVAYGLADEVLSRRLATV
MSGYTIPNVVQRTPQGERSYDVFSRLLSERIIFLGTEIDDGVANVVIAQLLHLESSAPESEIAVYINSPGGSFTSLMAIY
DTMTFVQAPISTFCVGQAASTAAVLLAGGDPGRRFVLEHARVLLGQPASGGRRGTISDLALEAKEMVRIRAQVEEVLARH
THHDVATLRTDMDRDKVFTAEEAVAYGLADEVLSRRLATV
Nucleotide
Download Length: 603 bp
>NTDB_id=308319 EZV63_RS02745 WP_037762288.1 674949..675551(+) (clpP) [Streptomyces sp. VN1]
ATGAGCGGCTACACGATTCCGAACGTCGTCCAGCGCACCCCGCAGGGCGAGCGTTCCTACGACGTCTTCAGCCGGCTCCT
CTCGGAGCGGATCATCTTCCTGGGCACCGAGATCGACGACGGCGTCGCGAACGTCGTGATCGCGCAGCTCCTGCACCTGG
AGTCGTCGGCGCCGGAGAGCGAGATCGCCGTCTACATCAACTCCCCCGGCGGCTCGTTCACGTCGTTGATGGCGATCTAC
GACACGATGACCTTCGTGCAGGCGCCCATCTCCACCTTCTGCGTCGGGCAGGCGGCGTCCACGGCGGCGGTCCTGCTGGC
CGGCGGCGATCCGGGGCGGCGGTTCGTGCTGGAGCACGCCCGGGTCCTGCTGGGCCAGCCGGCCAGCGGCGGGCGCCGGG
GGACCATTTCCGACCTGGCGCTCGAGGCGAAGGAGATGGTGCGCATCCGCGCCCAGGTGGAGGAGGTGCTGGCCCGGCAC
ACGCACCACGACGTCGCGACCCTGCGCACGGACATGGACCGGGACAAGGTGTTCACCGCCGAGGAGGCGGTGGCGTACGG
GCTGGCCGACGAGGTCCTGAGCCGGCGGCTGGCCACGGTGTGA
ATGAGCGGCTACACGATTCCGAACGTCGTCCAGCGCACCCCGCAGGGCGAGCGTTCCTACGACGTCTTCAGCCGGCTCCT
CTCGGAGCGGATCATCTTCCTGGGCACCGAGATCGACGACGGCGTCGCGAACGTCGTGATCGCGCAGCTCCTGCACCTGG
AGTCGTCGGCGCCGGAGAGCGAGATCGCCGTCTACATCAACTCCCCCGGCGGCTCGTTCACGTCGTTGATGGCGATCTAC
GACACGATGACCTTCGTGCAGGCGCCCATCTCCACCTTCTGCGTCGGGCAGGCGGCGTCCACGGCGGCGGTCCTGCTGGC
CGGCGGCGATCCGGGGCGGCGGTTCGTGCTGGAGCACGCCCGGGTCCTGCTGGGCCAGCCGGCCAGCGGCGGGCGCCGGG
GGACCATTTCCGACCTGGCGCTCGAGGCGAAGGAGATGGTGCGCATCCGCGCCCAGGTGGAGGAGGTGCTGGCCCGGCAC
ACGCACCACGACGTCGCGACCCTGCGCACGGACATGGACCGGGACAAGGTGTTCACCGCCGAGGAGGCGGTGGCGTACGG
GCTGGCCGACGAGGTCCTGAGCCGGCGGCTGGCCACGGTGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
47.619 |
94.5 |
0.45 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
45.789 |
95 |
0.435 |
| clpP | Streptococcus pyogenes MGAS315 |
39.062 |
96 |
0.375 |
| clpP | Streptococcus pyogenes JRS4 |
39.062 |
96 |
0.375 |
| clpP | Streptococcus pneumoniae TIGR4 |
38.021 |
96 |
0.365 |
| clpP | Streptococcus pneumoniae D39 |
38.021 |
96 |
0.365 |
| clpP | Streptococcus pneumoniae R6 |
38.021 |
96 |
0.365 |
| clpP | Streptococcus pneumoniae Rx1 |
38.021 |
96 |
0.365 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
37.436 |
97.5 |
0.365 |
| clpP | Streptococcus mutans UA159 |
38.624 |
94.5 |
0.365 |