Detailed information NTG0308318

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: EZV63_RS02740
• Genome accession: NZ_CP036534
• Coordinates: 674294..674947 (+)
• Length: 217 a.a.
• NCBI ID: WP_031029055.1
• Uniprot ID: -
• Organism: Streptomyces sp. VN1
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 669294..679947

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EZV63_RS02710 (EZV63_02765)	-	669455..669958 (-)	504	WP_166623550.1	DUF6328 family protein	-
EZV63_RS02715 (EZV63_02770)	-	670130..670474 (+)	345	WP_070387401.1	hypothetical protein	-
EZV63_RS02720 (EZV63_02775)	-	670517..671500 (-)	984	WP_166623551.1	aldo/keto reductase	-
EZV63_RS02725 (EZV63_02780)	-	671505..672725 (-)	1221	WP_166623552.1	FAD-dependent monooxygenase	-
EZV63_RS02730 (EZV63_02785)	-	672815..673516 (-)	702	WP_070387402.1	ribonuclease H	-
EZV63_RS02735 (EZV63_02790)	-	673556..674038 (-)	483	WP_037762290.1	VOC family protein	-
EZV63_RS02740 (EZV63_02795)	clpP	674294..674947 (+)	654	WP_031029055.1	ATP-dependent Clp protease proteolytic subunit	Regulator
EZV63_RS02745 (EZV63_02800)	clpP	674949..675551 (+)	603	WP_037762288.1	ATP-dependent Clp protease proteolytic subunit	Regulator
EZV63_RS02750 (EZV63_02805)	-	675607..676050 (-)	444	WP_070387403.1	helix-turn-helix transcriptional regulator	-
EZV63_RS02755 (EZV63_02810)	-	676239..677136 (+)	898	Protein_518	RNA polymerase sigma factor SigF	-
EZV63_RS02760 (EZV63_02815)	-	677201..677656 (-)	456	WP_031029060.1	ATP-binding protein	-
EZV63_RS02765 (EZV63_02820)	-	677802..678386 (+)	585	WP_037762280.1	PRC-barrel domain-containing protein	-
EZV63_RS02770 (EZV63_02825)	-	678383..678799 (+)	417	WP_166623553.1	hypothetical protein	-

Sequence

Protein

• Length: 217 a.a.
• Molecular weight: 23409.48 Da
• Isoelectric Point: 4.8591

>NTDB_id=308318 EZV63_RS02740 WP_031029055.1 674294..674947(+) (clpP) [Streptomyces sp. VN1]
MSPLIAGPGPAAPPRAEEGDTPATPFDDRLAAQLLDQRIVLLGTQVDEVSANRVCAQLLILSSQDPRTDISLYINSPGGS
VHAGLAVYDTMQLIPNDVSTLAMGFAASMGQFLLSVGAPGKRYALPNARVMMHQPSAGIGGTTADIEIQADSLDYIKRTM
ERITAEHTGQSPETIRRDGDRDRWFTAEQAREYGMVDQVVQSFTDVRPAAARRRMGL

Nucleotide

• Length: 654 bp

>NTDB_id=308318 EZV63_RS02740 WP_031029055.1 674294..674947(+) (clpP) [Streptomyces sp. VN1]
ATGTCTCCACTCATCGCCGGCCCCGGCCCGGCCGCACCGCCCCGGGCGGAGGAGGGCGACACGCCCGCCACCCCGTTCGA
CGACCGCCTCGCCGCGCAGCTGCTCGACCAACGGATCGTGCTGCTGGGCACGCAGGTCGACGAGGTGTCCGCGAACCGGG
TCTGCGCCCAGCTGCTGATCCTGTCCTCGCAGGACCCGCGCACCGACATCAGCCTGTACATCAACAGCCCCGGTGGTTCC
GTGCACGCGGGGCTCGCCGTCTACGACACGATGCAGCTGATCCCCAACGACGTCTCGACGCTCGCCATGGGATTCGCCGC
CAGCATGGGCCAGTTCCTGCTGAGCGTCGGCGCGCCGGGCAAGCGCTACGCGCTGCCGAACGCGCGGGTGATGATGCACC
AGCCGTCCGCGGGCATCGGCGGCACCACCGCCGACATCGAGATCCAGGCCGACAGCCTGGACTACATCAAGCGGACCATG
GAGCGGATCACCGCCGAGCACACCGGGCAGAGCCCGGAGACCATTCGCAGGGACGGGGACCGGGACCGGTGGTTCACGGC
CGAACAGGCCAGGGAGTACGGAATGGTGGACCAGGTCGTCCAGTCCTTCACGGACGTGCGCCCGGCCGCCGCCAGGCGAC
GGATGGGACTCTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (31-201)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	48.876	82.028	0.401
clpP	Streptococcus pneumoniae Rx1	47.399	79.724	0.378
clpP	Streptococcus pneumoniae D39	47.399	79.724	0.378
clpP	Streptococcus pneumoniae R6	47.399	79.724	0.378
clpP	Streptococcus pneumoniae TIGR4	47.399	79.724	0.378
clpP	Lactococcus lactis subsp. cremoris KW2	41.327	90.323	0.373
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	46.243	79.724	0.369
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	40.816	90.323	0.369