Detailed information NTG0308158

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: EZY40_RS01745
• Genome accession: NZ_CP036530
• Coordinates: 330662..331252 (+)
• Length: 196 a.a.
• NCBI ID: WP_002985850.1
• Uniprot ID: A0A9X9QW05
• Organism: Streptococcus pyogenes strain STAB09023
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 325662..336252

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EZY40_RS01725 (EZY40_01740)	-	326474..327919 (-)	1446	WP_031488572.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	-
EZY40_RS01730 (EZY40_01745)	-	328007..329641 (+)	1635	WP_031488573.1	polysaccharide biosynthesis protein	-
EZY40_RS01735 (EZY40_01750)	upp	329809..330438 (+)	630	WP_031488574.1	uracil phosphoribosyltransferase	-
EZY40_RS01745 (EZY40_01760)	clpP	330662..331252 (+)	591	WP_002985850.1	ATP-dependent Clp protease proteolytic subunit	Regulator
EZY40_RS01750 (EZY40_01765)	-	331747..332022 (+)	276	WP_002985847.1	YlbG family protein	-
EZY40_RS01755 (EZY40_01770)	tmk	332271..332906 (+)	636	WP_014635306.1	dTMP kinase	-
EZY40_RS01760 (EZY40_01775)	-	332924..333799 (+)	876	WP_011528291.1	DNA polymerase III subunit delta'	-
EZY40_RS08625	-	333924..334058 (+)	135	WP_014635307.1	tpl protein	-
EZY40_RS01770 (EZY40_01785)	yabA	334462..334785 (+)	324	WP_002985838.1	DNA replication initiation control protein YabA	-
EZY40_RS01775 (EZY40_01790)	rsmI	334790..335653 (+)	864	WP_021733048.1	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	-
EZY40_RS01780 (EZY40_01795)	-	335680..336072 (+)	393	WP_154079606.1	DUF5684 domain-containing protein	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21648.88 Da
• Isoelectric Point: 5.2834

>NTDB_id=308158 EZY40_RS01745 WP_002985850.1 330662..331252(+) (clpP) [Streptococcus pyogenes strain STAB09023]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELK

Nucleotide

• Length: 591 bp

>NTDB_id=308158 EZY40_RS01745 WP_002985850.1 330662..331252(+) (clpP) [Streptococcus pyogenes strain STAB09023]
ATGATTCCTGTTGTTATTGAACAAACTAGCCGTGGAGAACGTTCTTATGACATTTATTCACGTTTATTAAAAGACCGTAT
TATCATGTTAACAGGGCCTGTCGAAGACAACATGGCCAACTCTGTCATAGCGCAGCTCTTATTCCTTGACGCGCAAGACA
ACACGAAAGATATCTACCTATATGTCAACACACCAGGTGGCTCTGTCTCAGCAGGCTTGGCTATTGTCGATACCATGAAC
TTTATCAAGGCCGATGTGCAAACTATTGTCATGGGTATGGCAGCTTCTATGGGGACAGTCATTGCTTCATCAGGAACAAA
AGGCAAACGCTTTATGTTACCAAATGCAGAGTATATGATCCACCAGCCAATGGGTGGCACAGGCGGTGGCACGCAACAAA
CGGATATGGCTATCGCAGCAGAACATCTCTTAAAAACACGTCACCGTTTAGAAAAAATCTTAGCGCAAAATGCTGGAAAA
ACGATTAAACAAATCCATAAAGATGCTGAGCGTGATTATTGGATGAGTGCTGAAGAAACCTTGGCTTACGGTTTCATTGA
TGAAATCATGGAAAACAACGAACTAAAATAA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (11-192)

3D structure

• AlphaFold DB: A0A9X9QW05

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes MGAS315	100	100	1
clpP	Streptococcus pyogenes JRS4	100	100	1
clpP	Streptococcus mutans UA159	90.816	100	0.908
clpP	Streptococcus pneumoniae Rx1	90.769	99.49	0.903
clpP	Streptococcus pneumoniae D39	90.769	99.49	0.903
clpP	Streptococcus pneumoniae R6	90.769	99.49	0.903
clpP	Streptococcus pneumoniae TIGR4	90.769	99.49	0.903
clpP	Streptococcus thermophilus LMG 18311	89.796	100	0.898
clpP	Streptococcus thermophilus LMD-9	89.796	100	0.898
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	86.224	100	0.862
clpP	Lactococcus lactis subsp. cremoris KW2	85.714	100	0.857
clpP	Bacillus subtilis subsp. subtilis str. 168	57.143	100	0.571
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	56.995	98.469	0.561