Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | DY328_RS01385 | Genome accession | NZ_CP031556 |
| Coordinates | 263847..264437 (-) | Length | 196 a.a. |
| NCBI ID | WP_000613483.1 | Uniprot ID | A0AAV3JHA0 |
| Organism | Streptococcus agalactiae strain Sag27 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 258847..269437
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DY328_RS01360 (DY328_01360) | - | 259485..260249 (-) | 765 | WP_001185981.1 | ABC transporter ATP-binding protein | - |
| DY328_RS01365 (DY328_01365) | - | 260250..261203 (-) | 954 | WP_000662323.1 | branched-chain amino acid ABC transporter permease | - |
| DY328_RS01370 (DY328_01370) | - | 261206..262075 (-) | 870 | WP_000941400.1 | branched-chain amino acid ABC transporter permease | - |
| DY328_RS01375 (DY328_01375) | - | 262181..263347 (-) | 1167 | WP_000415515.1 | ABC transporter substrate-binding protein | - |
| DY328_RS01380 (DY328_01380) | - | 263502..263747 (-) | 246 | WP_001041186.1 | DUF2129 domain-containing protein | - |
| DY328_RS01385 (DY328_01385) | clpP | 263847..264437 (-) | 591 | WP_000613483.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| DY328_RS01390 (DY328_01390) | upp | 264562..265191 (-) | 630 | WP_000514490.1 | uracil phosphoribosyltransferase | - |
| DY328_RS01395 (DY328_01395) | - | 265301..266470 (-) | 1170 | WP_000634087.1 | MalY/PatB family protein | - |
| DY328_RS01400 (DY328_01400) | - | 266606..267154 (-) | 549 | WP_001019793.1 | tRNA (cytidine(34)-2'-O)-methyltransferase | - |
| DY328_RS01405 (DY328_01405) | - | 267327..268679 (-) | 1353 | WP_000427463.1 | APC family permease | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21550.52 Da Isoelectric Point: 4.5933
>NTDB_id=307565 DY328_RS01385 WP_000613483.1 263847..264437(-) (clpP) [Streptococcus agalactiae strain Sag27]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGQVEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQSDMAIAAEHLLKTRHTLEKILADNSGQ
SIEKVHDDAERDRWMSAQETLDYGFIDAIMENNNLQ
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGQVEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQSDMAIAAEHLLKTRHTLEKILADNSGQ
SIEKVHDDAERDRWMSAQETLDYGFIDAIMENNNLQ
Nucleotide
Download Length: 591 bp
>NTDB_id=307565 DY328_RS01385 WP_000613483.1 263847..264437(-) (clpP) [Streptococcus agalactiae strain Sag27]
ATGATTCCAGTAGTTATTGAACAAACAAGTCGTGGTGAACGTTCTTATGATATTTACTCACGTCTTTTAAAAGATCGTAT
TATTATGTTGACAGGCCAAGTTGAGGATAATATGGCCAATAGTATCATTGCACAGTTATTGTTTCTCGATGCACAAGATA
ATACAAAGGATATTTACCTTTATGTCAATACACCAGGTGGTTCAGTATCGGCTGGACTTGCTATTGTGGACACCATGAAC
TTCATTAAATCGGACGTACAGACGATTGTTATGGGGATGGCTGCTTCGATGGGAACCATTATTGCTTCAAGTGGTGCTAA
AGGAAAACGTTTTATGTTACCGAATGCAGAATATATGATCCACCAACCAATGGGCGGAACAGGCGGAGGTACACAGCAAT
CTGATATGGCTATCGCTGCTGAGCATCTTTTAAAAACGCGTCATACTTTAGAAAAAATCTTAGCTGATAATTCTGGTCAA
TCTATTGAAAAAGTCCATGATGATGCAGAGCGTGATCGTTGGATGAGTGCTCAAGAAACACTTGATTATGGCTTTATTGA
TGCTATTATGGAAAATAATAATTTACAATAA
ATGATTCCAGTAGTTATTGAACAAACAAGTCGTGGTGAACGTTCTTATGATATTTACTCACGTCTTTTAAAAGATCGTAT
TATTATGTTGACAGGCCAAGTTGAGGATAATATGGCCAATAGTATCATTGCACAGTTATTGTTTCTCGATGCACAAGATA
ATACAAAGGATATTTACCTTTATGTCAATACACCAGGTGGTTCAGTATCGGCTGGACTTGCTATTGTGGACACCATGAAC
TTCATTAAATCGGACGTACAGACGATTGTTATGGGGATGGCTGCTTCGATGGGAACCATTATTGCTTCAAGTGGTGCTAA
AGGAAAACGTTTTATGTTACCGAATGCAGAATATATGATCCACCAACCAATGGGCGGAACAGGCGGAGGTACACAGCAAT
CTGATATGGCTATCGCTGCTGAGCATCTTTTAAAAACGCGTCATACTTTAGAAAAAATCTTAGCTGATAATTCTGGTCAA
TCTATTGAAAAAGTCCATGATGATGCAGAGCGTGATCGTTGGATGAGTGCTCAAGAAACACTTGATTATGGCTTTATTGA
TGCTATTATGGAAAATAATAATTTACAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus thermophilus LMG 18311 |
92.347 |
100 |
0.923 |
| clpP | Streptococcus thermophilus LMD-9 |
92.347 |
100 |
0.923 |
| clpP | Streptococcus pneumoniae Rx1 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae D39 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae R6 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae TIGR4 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pyogenes JRS4 |
89.286 |
100 |
0.893 |
| clpP | Streptococcus pyogenes MGAS315 |
89.286 |
100 |
0.893 |
| clpP | Streptococcus mutans UA159 |
88.776 |
100 |
0.888 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
85.204 |
100 |
0.852 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
84.694 |
100 |
0.847 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
58.031 |
98.469 |
0.571 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
57.895 |
96.939 |
0.561 |