Detailed information NTG0307352

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: L3107_RS06600
• Genome accession: NZ_CP031538
• Coordinates: 1274809..1275657 (+)
• Length: 282 a.a.
• NCBI ID: WP_021165349.1
• Uniprot ID: -
• Organism: Lactococcus cremoris strain 3107
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1269809..1280657

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L3107_RS06575 (L3107_1274)	ilvN	1270542..1271018 (+)	477	WP_021165352.1	acetolactate synthase small subunit	-
L3107_RS06580 (L3107_1275)	ilvC	1271064..1272086 (+)	1023	WP_021165351.1	ketol-acid reductoisomerase	-
L3107_RS06585 (L3107_1276)	ilvA	1272145..1273395 (+)	1251	WP_021165350.1	threonine ammonia-lyase IlvA	-
L3107_RS06590 (L3107_1277)	budA	1273530..1274240 (+)	711	WP_011676302.1	acetolactate decarboxylase	-
L3107_RS06595 (L3107_1278)	-	1274280..1274660 (+)	381	WP_014572603.1	RidA family protein	-
L3107_RS06600 (L3107_1279)	dprA	1274809..1275657 (+)	849	WP_021165349.1	DNA-processing protein DprA	Machinery gene
L3107_RS06605 (L3107_1280)	topA	1275923..1278049 (+)	2127	WP_015082465.1	type I DNA topoisomerase	-
L3107_RS06610 (L3107_1281)	trmFO	1278121..1279467 (+)	1347	WP_021165348.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
L3107_RS06615 (L3107_1282)	xerS	1279517..1280587 (-)	1071	WP_014572599.1	tyrosine recombinase XerS	-

Sequence

Protein

• Length: 282 a.a.
• Molecular weight: 31968.18 Da
• Isoelectric Point: 9.9799

>NTDB_id=307352 L3107_RS06600 WP_021165349.1 1274809..1275657(+) (dprA) [Lactococcus cremoris strain 3107]
MITNFDLFRWKKAGMTNLGVNKLLKFFRKYDIKISLRQMGQVAQVKSIPNFIEQYKNQDVKKLRIDYKKFSSFSILDDLY
PERLREIYNPPVLIFYQGNIDLLKNPKLAFVGSRLAGQSKIKAVQKIITELNQSFTIVSGLAKGIDTASHLSAIKTKTPT
IAVIGTGLDIFYPLENRKIQEYLAKNQLVLSEYSLGEKPLKYHFPERNRIIAGLSRGVVVVEAKLRSGSLITCERALEEG
RDIFAIPGNIADGTSDGCNHLIQQGAKLVYQAQDILEEYLYN

Nucleotide

• Length: 849 bp

>NTDB_id=307352 L3107_RS06600 WP_021165349.1 1274809..1275657(+) (dprA) [Lactococcus cremoris strain 3107]
ATGATTACAAATTTTGATTTATTTCGTTGGAAAAAAGCAGGAATGACCAATCTTGGTGTAAATAAGCTCTTAAAATTTTT
CCGCAAATATGATATAAAAATAAGCTTACGACAAATGGGACAAGTGGCTCAAGTCAAATCAATCCCTAACTTTATCGAAC
AATATAAAAATCAGGACGTAAAGAAACTCAGGATAGACTATAAAAAATTTTCCTCCTTTTCCATTCTTGATGACCTTTAT
CCCGAGCGTCTAAGAGAAATCTACAACCCACCCGTTTTAATTTTTTATCAGGGAAATATTGATTTATTAAAAAATCCTAA
ACTTGCCTTTGTTGGAAGCCGCCTAGCAGGTCAATCAAAGATAAAAGCTGTCCAAAAAATTATCACAGAATTGAATCAAT
CCTTTACAATAGTAAGCGGGCTTGCTAAAGGGATTGACACAGCCAGCCATCTGTCAGCAATTAAAACTAAAACACCAACA
ATTGCTGTTATTGGTACAGGATTGGATATTTTCTATCCACTAGAAAATCGTAAAATACAGGAATATCTAGCAAAAAATCA
ATTAGTTTTAAGTGAATATTCATTAGGCGAAAAACCACTTAAATACCACTTTCCAGAGCGCAATCGAATTATTGCTGGTC
TTTCACGGGGAGTTGTTGTCGTGGAAGCAAAATTAAGAAGTGGCAGTTTAATCACCTGTGAAAGGGCACTGGAAGAAGGA
AGAGATATCTTTGCCATCCCTGGAAATATTGCAGATGGAACATCTGATGGCTGTAATCATCTTATTCAACAAGGAGCAAA
ACTTGTCTATCAAGCTCAAGATATTTTAGAAGAATATTTGTACAATTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

• DNA recombination-mediator protein A (DNA_processg_A) (69-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	97.872	100	0.979
dprA	Streptococcus mutans UA159	58.993	98.582	0.582
dprA/cilB/dalA	Streptococcus mitis SK321	55.714	99.291	0.553
dprA/cilB/dalA	Streptococcus pneumoniae R6	55.357	99.291	0.55
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	55.357	99.291	0.55
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	55.357	99.291	0.55
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	55.357	99.291	0.55
dprA/cilB/dalA	Streptococcus pneumoniae D39	55.357	99.291	0.55
dprA	Legionella pneumophila strain ERS1305867	38.849	98.582	0.383
dprA	Vibrio campbellii strain DS40M4	35.314	100	0.379
dprA	Bacillus subtilis subsp. subtilis str. 168	38.909	97.518	0.379
dprA	Haemophilus influenzae Rd KW20	39.259	95.745	0.376