Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Machinery gene
Locus tag   DV175_RS01600 Genome accession   NZ_CP031324
Coordinates   288441..289673 (+) Length   410 a.a.
NCBI ID   WP_002216405.1    Uniprot ID   Q7DDR1
Organism   Neisseria meningitidis strain M23347     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 283441..294673
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV175_RS01575 fabI 284317..285102 (-) 786 WP_002223367.1 enoyl-ACP reductase FabI -
  DV175_RS01580 dapD 285257..286078 (-) 822 WP_002237616.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase -
  DV175_RS01585 - 286088..286318 (-) 231 WP_025462714.1 hypothetical protein -
  DV175_RS01590 pgi 286288..287931 (-) 1644 WP_002237615.1 glucose-6-phosphate isomerase -
  DV175_RS01600 pilG 288441..289673 (+) 1233 WP_002216405.1 type 4 pilus assembly protein PilG Machinery gene
  DV175_RS01605 pilD 289747..290607 (+) 861 WP_002220276.1 A24 family peptidase Machinery gene
  DV175_RS01610 coaE 290609..291241 (+) 633 WP_002216402.1 dephospho-CoA kinase -
  DV175_RS01615 - 291234..291443 (+) 210 WP_002216401.1 DNA gyrase inhibitor YacG -
  DV175_RS01620 pilF 291528..293204 (-) 1677 WP_002221967.1 type IV-A pilus assembly ATPase PilB Machinery gene
  DV175_RS01640 - 293695..294141 (-) 447 WP_002216397.1 DUF441 domain-containing protein -

Sequence


Protein


Download         Length: 410 a.a.        Molecular weight: 45273.29 Da        Isoelectric Point: 9.9273

>NTDB_id=305586 DV175_RS01600 WP_002216405.1 288441..289673(+) (pilG) [Neisseria meningitidis strain M23347]
MAKNGGFSLFAKKEKRFIFEGRHSASDKLVNGEVSAFTEEEARKKLAKRGIRPLQITRVKTSSKRKITQEDITVFTRQLS
TMIKAGLPLMQAFEIVARGHGNPSMTEMLMEIRGEVEQGSSLSRAFSNHPKYFDRFYCNLVAAGETGGVLESLLDKLAIY
KEKTQAIRKKVKTALTYPVSVIAVAIGLVFVMMIFVLPAFKEVYANMGAELPALTQTVMDMSDFFVSYGWMVLIALGFAI
YGFLKLKARSIKIQRRMDAILLRMPIFGDIVRKGTIARWGRTTATLIAAGVPLVDVLDSTAGAAGNLIYEEATREIRTRV
IQGLSMTSGMRATELFPNMMLQMSSIGEESGSLDDMLNKAAEFYEDEVDNAVGRLSAMMEPIIIVILGLVIGTLLVAMYL
PLFNLGNVVA

Nucleotide


Download         Length: 1233 bp        

>NTDB_id=305586 DV175_RS01600 WP_002216405.1 288441..289673(+) (pilG) [Neisseria meningitidis strain M23347]
ATGGCTAAAAACGGAGGATTTTCTTTGTTCGCAAAGAAAGAAAAACGCTTTATCTTTGAAGGCAGGCATTCCGCCTCCGA
CAAACTGGTCAACGGCGAAGTATCCGCGTTTACCGAAGAAGAGGCGCGCAAAAAACTGGCAAAACGCGGCATCCGCCCGT
TGCAGATTACCCGTGTGAAAACAAGCTCCAAGCGCAAAATCACACAAGAAGACATCACCGTTTTCACCCGCCAGCTGTCC
ACGATGATTAAAGCGGGCCTGCCGCTGATGCAGGCATTTGAAATCGTGGCGCGCGGACACGGCAACCCGTCTATGACGGA
AATGCTGATGGAAATCCGAGGCGAAGTGGAACAGGGCAGCTCGTTGAGCCGCGCATTCTCAAACCACCCGAAATATTTCG
ACCGCTTCTACTGCAACCTGGTTGCGGCGGGCGAAACGGGCGGCGTATTGGAAAGCCTGCTGGACAAATTGGCAATTTAC
AAAGAAAAAACCCAGGCCATCCGCAAAAAGGTAAAAACCGCGCTGACCTATCCGGTATCCGTCATCGCCGTCGCCATCGG
TTTGGTATTCGTGATGATGATTTTCGTACTGCCCGCCTTTAAAGAAGTTTACGCCAATATGGGCGCGGAGCTTCCCGCAC
TGACCCAAACAGTGATGGATATGTCCGACTTTTTCGTCTCATACGGCTGGATGGTGCTGATCGCACTGGGCTTTGCCATA
TACGGCTTCCTTAAATTGAAGGCGCGTTCGATTAAAATCCAACGGCGTATGGATGCCATACTGCTGCGTATGCCGATTTT
CGGAGACATTGTCCGCAAAGGGACGATTGCCCGCTGGGGCAGGACGACGGCGACGCTGATTGCGGCAGGCGTGCCTTTGG
TCGATGTATTGGACTCCACTGCCGGCGCGGCGGGCAATTTAATCTATGAAGAAGCCACCCGGGAAATCCGTACGCGCGTC
ATCCAAGGTTTGTCTATGACTTCGGGGATGCGTGCGACGGAACTGTTCCCCAATATGATGTTGCAGATGTCTTCCATCGG
CGAGGAATCGGGTTCTTTGGACGATATGCTCAACAAAGCCGCCGAATTTTACGAAGACGAGGTGGACAATGCGGTCGGCA
GGCTGTCCGCTATGATGGAGCCGATCATTATCGTGATTTTAGGCTTGGTCATCGGCACGCTTCTGGTCGCCATGTATCTG
CCGCTGTTTAATTTGGGCAACGTGGTCGCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q7DDR1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Neisseria gonorrhoeae MS11

99.268

100

0.993

  pilG Neisseria meningitidis 44/76-A

98.537

100

0.985

  pilC Acinetobacter baumannii D1279779

47.487

97.073

0.461

  pilC Acinetobacter baylyi ADP1

45.614

97.317

0.444

  pilC Pseudomonas stutzeri DSM 10701

44.913

98.293

0.441

  pilC Legionella pneumophila strain ERS1305867

44.836

96.829

0.434

  pilC Vibrio cholerae strain A1552

41.045

98.049

0.402

  pilC Vibrio campbellii strain DS40M4

39.163

99.024

0.388


Multiple sequence alignment