Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   ETT44_RS03740 Genome accession   NZ_CP035455
Coordinates   688708..688890 (+) Length   60 a.a.
NCBI ID   WP_011184726.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm197     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 683708..693890
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT44_RS03705 (ETT44_03705) - 683916..684344 (+) 429 WP_011528780.1 DUF1617 family protein -
  ETT44_RS03710 (ETT44_03710) - 684347..684979 (+) 633 WP_011528779.1 hypothetical protein -
  ETT44_RS03715 (ETT44_03715) - 684991..685263 (+) 273 WP_011017397.1 hypothetical protein -
  ETT44_RS03720 (ETT44_03720) - 685260..685487 (+) 228 WP_003058873.1 phage holin -
  ETT44_RS03725 (ETT44_03725) - 685606..686823 (+) 1218 WP_014635574.1 peptidoglycan amidohydrolase family protein -
  ETT44_RS03730 (ETT44_03730) speC 686892..687599 (-) 708 WP_002985327.1 streptococcal pyrogenic exotoxin SpeC -
  ETT44_RS03735 (ETT44_03735) mf2 687710..688468 (-) 759 WP_011184727.1 DNase Mf2 -
  ETT44_RS03740 (ETT44_03740) prx 688708..688890 (+) 183 WP_011184726.1 hypothetical protein Regulator
  ETT44_RS03745 (ETT44_03745) - 689422..691284 (+) 1863 WP_136021964.1 heavy metal translocating P-type ATPase -
  ETT44_RS03750 (ETT44_03750) - 691584..692519 (-) 936 WP_136021963.1 dihydroorotate oxidase -
  ETT44_RS03755 (ETT44_03755) - 692758..693453 (+) 696 WP_002983928.1 phosphoglycerate mutase -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6936.91 Da        Isoelectric Point: 4.1954

>NTDB_id=303559 ETT44_RS03740 WP_011184726.1 688708..688890(+) (prx) [Streptococcus pyogenes strain emm197]
MLTYDEFKQAIDNGYITADTVMIVRKNGQIFDYVLPNEKIKNGEIVTDEKVEEVLVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=303559 ETT44_RS03740 WP_011184726.1 688708..688890(+) (prx) [Streptococcus pyogenes strain emm197]
ATGCTAACATACGACGAATTTAAACAAGCAATTGACAATGGATATATCACAGCAGACACAGTAATGATCGTGCGCAAGAA
CGGACAGATTTTTGATTATGTGTTGCCGAATGAGAAGATAAAGAATGGAGAAATTGTGACAGACGAAAAAGTGGAAGAGG
TGCTGGTGGAGCTTTCGAGATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

98.333

100

0.983
  prx Streptococcus pyogenes MGAS8232

86.667

100

0.867
  prx Streptococcus pyogenes MGAS315

78.333

100

0.783
  prx Streptococcus pyogenes MGAS315

75

100

0.75
  prx Streptococcus pyogenes MGAS315

83.721

71.667

0.6
  prx Streptococcus pyogenes MGAS315

85.366

68.333

0.583
  prx Streptococcus pyogenes MGAS315

71.429

70

0.5