Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   ETT44_RS02050 Genome accession   NZ_CP035455
Coordinates   365148..365330 (+) Length   60 a.a.
NCBI ID   WP_011184907.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm197     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 360148..370330
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT44_RS02020 (ETT44_02020) - 360291..360518 (+) 228 WP_003058873.1 phage holin -
  ETT44_RS02025 (ETT44_02025) - 360634..361836 (+) 1203 WP_020837640.1 glucosaminidase domain-containing protein -
  ETT44_RS02030 (ETT44_02030) - 361976..362500 (+) 525 WP_011017840.1 Panacea domain-containing protein -
  ETT44_RS02035 (ETT44_02035) - 362488..363354 (+) 867 WP_011888701.1 DUF334 domain-containing protein -
  ETT44_RS02040 (ETT44_02040) - 363404..363838 (-) 435 WP_011017966.1 hypothetical protein -
  ETT44_RS02045 (ETT44_02045) sda3 364110..364910 (-) 801 WP_011285611.1 streptodornase Sda3 -
  ETT44_RS02050 (ETT44_02050) prx 365148..365330 (+) 183 WP_011184907.1 hypothetical protein Regulator
  ETT44_RS02055 (ETT44_02055) uvrA 365557..368385 (+) 2829 WP_011054967.1 excinuclease ABC subunit UvrA Machinery gene
  ETT44_RS02060 (ETT44_02060) - 368501..369574 (+) 1074 WP_014635677.1 Xaa-Pro peptidase family protein -
  ETT44_RS02065 (ETT44_02065) - 369609..370070 (+) 462 WP_002988493.1 deaminase -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6976.99 Da        Isoelectric Point: 4.2550

>NTDB_id=303540 ETT44_RS02050 WP_011184907.1 365148..365330(+) (prx) [Streptococcus pyogenes strain emm197]
MLTYDEFKQAIDRGYITGDTVMIVRKNGQIFDYVLPHEKVKNGEVVTEEIVEEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=303540 ETT44_RS02050 WP_011184907.1 365148..365330(+) (prx) [Streptococcus pyogenes strain emm197]
ATGCTAACATACGACGAGTTTAAACAAGCGATTGACCGTGGATATATCACAGGAGACACAGTTATGATCGTGCGTAAAAA
CGGACAGATTTTTGATTATGTTTTGCCACATGAGAAAGTAAAAAATGGAGAAGTTGTGACCGAGGAGATAGTGGAAGAAG
TGATGGTGGAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

85

100

0.85
  prx Streptococcus pyogenes MGAS8232

85

100

0.85
  prx Streptococcus pyogenes MGAS315

85

100

0.85
  prx Streptococcus pyogenes MGAS315

83.333

100

0.833
  prx Streptococcus pyogenes MGAS315

80

100

0.8
  prx Streptococcus pyogenes MGAS315

88.372

71.667

0.633
  prx Streptococcus pyogenes MGAS315

78.571

70

0.55

Multiple sequence alignment