Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   ETT46_RS05285 Genome accession   NZ_CP035453
Coordinates   1017421..1017609 (-) Length   62 a.a.
NCBI ID   WP_002993136.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm100     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1012421..1022609
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT46_RS05260 (ETT46_05255) - 1014225..1014596 (+) 372 WP_002989617.1 GntR family transcriptional regulator -
  ETT46_RS05265 (ETT46_05260) - 1014596..1015294 (+) 699 WP_002992425.1 ABC transporter ATP-binding protein -
  ETT46_RS05270 (ETT46_05265) - 1015304..1016089 (+) 786 WP_002984433.1 hypothetical protein -
  ETT46_RS05275 (ETT46_05270) - 1016216..1016830 (-) 615 WP_002989607.1 TVP38/TMEM64 family protein -
  ETT46_RS05285 (ETT46_05280) prx 1017421..1017609 (-) 189 WP_002993136.1 hypothetical protein Regulator
  ETT46_RS05290 (ETT46_05285) spel 1017724..1018512 (-) 789 WP_020833516.1 streptococcal pyrogenic exotoxin SpeL -
  ETT46_RS05295 (ETT46_05290) - 1018794..1019573 (-) 780 WP_109821332.1 exotoxin beta-grasp domain-containing protein -
  ETT46_RS05300 (ETT46_05295) - 1019877..1020743 (-) 867 WP_011054729.1 DUF334 domain-containing protein -
  ETT46_RS05305 (ETT46_05300) - 1020731..1021255 (-) 525 WP_011017840.1 Panacea domain-containing protein -
  ETT46_RS05310 (ETT46_05305) - 1021395..1022600 (-) 1206 WP_136285676.1 glucosaminidase domain-containing protein -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7239.28 Da        Isoelectric Point: 3.9944

>NTDB_id=303368 ETT46_RS05285 WP_002993136.1 1017421..1017609(-) (prx) [Streptococcus pyogenes strain emm100]
MLTYDEFKQAIDNGYITGDTVIIVRKNGQIFDYVLPGEKVRPWEVVTEEVVEEVMVELDYIK

Nucleotide


Download         Length: 189 bp        

>NTDB_id=303368 ETT46_RS05285 WP_002993136.1 1017421..1017609(-) (prx) [Streptococcus pyogenes strain emm100]
ATGCTAACATACGACGAATTTAAGCAAGCAATTGACAACGGATATATCACAGGAGACACAGTAATAATCGTGCGCAAAAA
CGGACAGATTTTTGATTATGTGTTGCCTGGTGAGAAAGTCAGACCATGGGAGGTTGTGACCGAGGAGGTAGTGGAAGAAG
TGATGGTGGAATTAGACTATATCAAATGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

85.484

100

0.855
  prx Streptococcus pyogenes MGAS8232

82.759

93.548

0.774
  prx Streptococcus pyogenes MGAS315

81.356

95.161

0.774
  prx Streptococcus pyogenes MGAS315

81.356

95.161

0.774
  prx Streptococcus pyogenes MGAS315

79.31

93.548

0.742
  prx Streptococcus pyogenes MGAS315

95.238

67.742

0.645
  prx Streptococcus pyogenes MGAS315

80.488

66.129

0.532

Multiple sequence alignment