Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   ETT52_RS06220 Genome accession   NZ_CP035447
Coordinates   1237065..1237247 (-) Length   60 a.a.
NCBI ID   WP_136040097.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm97.1     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1232065..1242247
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT52_RS06210 (ETT52_06200) rocA 1233500..1234855 (-) 1356 WP_136026482.1 transcriptional regulator RocA -
  ETT52_RS06215 (ETT52_06205) rlmD 1235519..1236874 (-) 1356 WP_136109105.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  ETT52_RS06220 (ETT52_06210) prx 1237065..1237247 (-) 183 WP_136040097.1 Paratox Regulator
  ETT52_RS06225 (ETT52_06215) - 1237441..1237650 (-) 210 WP_048327315.1 helix-turn-helix domain-containing protein -
  ETT52_RS09215 - 1237804..1237950 (+) 147 WP_164406938.1 hypothetical protein -
  ETT52_RS06230 (ETT52_06220) - 1238091..1238342 (+) 252 WP_048327312.1 hypothetical protein -
  ETT52_RS06235 (ETT52_06225) - 1238464..1239264 (+) 801 WP_136058973.1 recombinase family protein -
  ETT52_RS06240 (ETT52_06230) - 1239384..1240250 (-) 867 WP_011054729.1 DUF334 domain-containing protein -
  ETT52_RS06245 (ETT52_06235) - 1240238..1240762 (-) 525 WP_011017840.1 Panacea domain-containing protein -
  ETT52_RS06250 (ETT52_06240) - 1240902..1242107 (-) 1206 Protein_1161 glucosaminidase domain-containing protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6934.91 Da        Isoelectric Point: 4.1220

>NTDB_id=302802 ETT52_RS06220 WP_136040097.1 1237065..1237247(-) (prx) [Streptococcus pyogenes strain emm97.1]
MLTYDEFKQAIDNGYITADTVMIVRKNGQIFDYVLPHEKVKNGEVVTEEVVEEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=302802 ETT52_RS06220 WP_136040097.1 1237065..1237247(-) (prx) [Streptococcus pyogenes strain emm97.1]
ATGCTAACATACGACGAATTTAAGCAAGCAATTGACAATGGATATATCACAGCAGACACAGTTATGATCGTGCGTAAAAA
CGGACAGATTTTTGATTATGTTTTGCCACATGAGAAAGTAAAAAATGGAGAAGTTGTGACCGAGGAGGTAGTGGAAGAAG
TGATGGTGGAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS8232

85

100

0.85
  prx Streptococcus pyogenes MGAS315

85

100

0.85
  prx Streptococcus pyogenes MGAS315

83.333

100

0.833
  prx Streptococcus pyogenes MGAS315

83.333

100

0.833
  prx Streptococcus pyogenes MGAS315

81.667

100

0.817
  prx Streptococcus pyogenes MGAS315

86.047

71.667

0.617
  prx Streptococcus pyogenes MGAS315

76.19

70

0.533