Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   ETT54_RS04970 Genome accession   NZ_CP035445
Coordinates   979333..979521 (-) Length   62 a.a.
NCBI ID   WP_136275039.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm92     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 974333..984521
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT54_RS04945 (ETT54_04940) - 976131..976502 (+) 372 WP_002989617.1 GntR family transcriptional regulator -
  ETT54_RS04950 (ETT54_04945) - 976502..977200 (+) 699 WP_002984437.1 ABC transporter ATP-binding protein -
  ETT54_RS04955 (ETT54_04950) - 977210..977995 (+) 786 WP_002984433.1 hypothetical protein -
  ETT54_RS04960 (ETT54_04955) - 978128..978742 (-) 615 WP_002989607.1 TVP38/TMEM64 family protein -
  ETT54_RS04970 (ETT54_04965) prx 979333..979521 (-) 189 WP_136275039.1 Paratox Regulator
  ETT54_RS04975 (ETT54_04970) speA 979742..980497 (+) 756 WP_009880239.1 streptococcal pyrogenic exotoxin SpeA -
  ETT54_RS04980 (ETT54_04975) - 980619..981278 (-) 660 WP_009880240.1 hypothetical protein -
  ETT54_RS04985 (ETT54_04980) - 981278..981499 (-) 222 WP_009880241.1 hypothetical protein -
  ETT54_RS04990 (ETT54_04985) - 981509..982282 (-) 774 WP_011054795.1 hypothetical protein -
  ETT54_RS04995 (ETT54_04990) - 982293..982895 (-) 603 WP_136282190.1 hypothetical protein -
  ETT54_RS05000 (ETT54_04995) - 982907..983671 (-) 765 WP_011054797.1 CHAP domain-containing protein -
  ETT54_RS05005 (ETT54_05000) - 983673..984005 (-) 333 WP_011054798.1 phage holin -
  ETT54_RS05010 (ETT54_05005) - 984005..984328 (-) 324 WP_015055952.1 hypothetical protein -
  ETT54_RS08975 - 984342..984464 (-) 123 WP_015055953.1 hypothetical protein -

Sequence


Protein


Download         Length: 62 a.a.        Molecular weight: 7266.32 Da        Isoelectric Point: 4.1191

>NTDB_id=302604 ETT54_RS04970 WP_136275039.1 979333..979521(-) (prx) [Streptococcus pyogenes strain emm92]
MLYIDEFKEAIDKGYILGDTVMIVRKNGQIFDYVLPHEEARNGEVVTEEKVEEVMVELDYIK

Nucleotide


Download         Length: 189 bp        

>NTDB_id=302604 ETT54_RS04970 WP_136275039.1 979333..979521(-) (prx) [Streptococcus pyogenes strain emm92]
ATGTTATATATAGATGAGTTTAAAGAAGCGATTGATAAGGGGTATATTTTAGGAGACACAGTTATGATCGTGCGTAAAAA
CGGACAGATTTTTGATTATGTGTTGCCGCATGAGGAAGCGAGAAATGGAGAAGTTGTGACAGAGGAGAAGGTGGAAGAAG
TGATGGTGGAATTAGACTATATCAAATGA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

91.935

100

0.919

  prx Streptococcus pyogenes MGAS315

77.966

95.161

0.742

  prx Streptococcus pyogenes MGAS8232

79.31

93.548

0.742

  prx Streptococcus pyogenes MGAS315

77.586

93.548

0.726

  prx Streptococcus pyogenes MGAS315

72.881

95.161

0.694

  prx Streptococcus pyogenes MGAS315

88.095

67.742

0.597

  prx Streptococcus pyogenes MGAS315

78.049

66.129

0.516


Multiple sequence alignment