Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   ETT56_RS03525 Genome accession   NZ_CP035443
Coordinates   671149..671331 (+) Length   60 a.a.
NCBI ID   WP_063632461.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm58     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 666149..676331
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT56_RS03490 (ETT56_03490) - 666371..666802 (+) 432 WP_063632964.1 DUF1617 family protein -
  ETT56_RS03495 (ETT56_03495) - 666805..667422 (+) 618 WP_010922094.1 DUF1366 domain-containing protein -
  ETT56_RS03500 (ETT56_03500) - 667432..667704 (+) 273 WP_019418840.1 hypothetical protein -
  ETT56_RS03505 (ETT56_03505) - 667701..667928 (+) 228 WP_063632963.1 phage holin -
  ETT56_RS03510 (ETT56_03510) - 668047..669264 (+) 1218 WP_014635574.1 peptidoglycan amidohydrolase family protein -
  ETT56_RS03515 (ETT56_03515) speC 669333..670040 (-) 708 WP_002985327.1 streptococcal pyrogenic exotoxin SpeC -
  ETT56_RS03520 (ETT56_03520) mf2 670151..670909 (-) 759 WP_014635573.1 DNase Mf2 -
  ETT56_RS03525 (ETT56_03525) prx 671149..671331 (+) 183 WP_063632461.1 hypothetical protein Regulator
  ETT56_RS03530 (ETT56_03530) - 671894..673756 (+) 1863 WP_063632928.1 heavy metal translocating P-type ATPase -
  ETT56_RS03535 (ETT56_03535) - 674056..674991 (-) 936 WP_021299339.1 dihydroorotate oxidase -
  ETT56_RS03540 (ETT56_03540) - 675230..675925 (+) 696 WP_002983928.1 phosphoglycerate mutase -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 7081.04 Da        Isoelectric Point: 4.1079

>NTDB_id=302413 ETT56_RS03525 WP_063632461.1 671149..671331(+) (prx) [Streptococcus pyogenes strain emm58]
MLTYDEFKQAIDNGYITADTVMIVRKNGQIFDYVLPNEKIRDWEVVTDEKVEEVLVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=302413 ETT56_RS03525 WP_063632461.1 671149..671331(+) (prx) [Streptococcus pyogenes strain emm58]
ATGCTAACATACGACGAATTTAAGCAAGCAATTGACAATGGATATATCACAGCAGACACAGTTATGATCGTGCGCAAGAA
CGGACAGATTTTTGATTATGTGTTGCCGAATGAGAAGATAAGAGATTGGGAGGTTGTGACAGACGAAAAAGTGGAAGAGG
TGCTGGTGGAGCTTTCGAGATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

91.667

100

0.917

  prx Streptococcus pyogenes MGAS8232

83.333

100

0.833

  prx Streptococcus pyogenes MGAS315

78.333

100

0.783

  prx Streptococcus pyogenes MGAS315

75

100

0.75

  prx Streptococcus pyogenes MGAS315

87.805

68.333

0.6

  prx Streptococcus pyogenes MGAS315

83.333

70

0.583

  prx Streptococcus pyogenes MGAS315

76.19

70

0.533


Multiple sequence alignment