Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   ETT69_RS03405 Genome accession   NZ_CP035430
Coordinates   619723..619902 (+) Length   59 a.a.
NCBI ID   WP_136019510.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm55     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 614723..624902
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT69_RS03370 (ETT69_03360) - 616050..616211 (+) 162 WP_012560658.1 hypothetical protein -
  ETT69_RS03375 (ETT69_03365) - 616214..616822 (+) 609 WP_136019516.1 DUF1366 domain-containing protein -
  ETT69_RS03380 (ETT69_03370) - 616834..617109 (+) 276 WP_136019515.1 hypothetical protein -
  ETT69_RS03385 (ETT69_03375) - 617106..617333 (+) 228 WP_136019514.1 phage holin -
  ETT69_RS03390 (ETT69_03380) - 617449..618645 (+) 1197 WP_136019513.1 glucosaminidase domain-containing protein -
  ETT69_RS03395 (ETT69_03385) - 618903..619364 (+) 462 WP_168389137.1 Panacea domain-containing protein -
  ETT69_RS03400 (ETT69_03390) - 619348..619662 (+) 315 WP_136019511.1 hypothetical protein -
  ETT69_RS03405 (ETT69_03395) prx 619723..619902 (+) 180 WP_136019510.1 Paratox Regulator
  ETT69_RS09890 (ETT69_03400) - 620352..620643 (+) 292 Protein_615 rod shape-determining protein RodA -
  ETT69_RS03415 (ETT69_03405) - 620746..621306 (+) 561 WP_136019538.1 HAD-IA family hydrolase -
  ETT69_RS03420 (ETT69_03410) gyrB 621307..623259 (+) 1953 WP_136019509.1 DNA topoisomerase (ATP-hydrolyzing) subunit B -

Sequence

Protein


Download         Length: 59 a.a.        Molecular weight: 6919.92 Da        Isoelectric Point: 3.9944

>NTDB_id=301180 ETT69_RS03405 WP_136019510.1 619723..619902(+) (prx) [Streptococcus pyogenes strain emm55]
MLTYDEFKQAIDDGYIVGDTVKIVRKNGQIFDYVLPGEPVRLWEVATEEKVEEVLMELW

Nucleotide


Download         Length: 180 bp        

>NTDB_id=301180 ETT69_RS03405 WP_136019510.1 619723..619902(+) (prx) [Streptococcus pyogenes strain emm55]
ATGCTAACATACGACGAATTTAAGCAAGCTATTGATGACGGATATATCGTAGGCGATACAGTTAAGATCGTGCGCAAAAA
CGGACAGATTTTTGATTATGTGTTACCTGGTGAGCCTGTAAGATTGTGGGAAGTTGCGACAGAGGAAAAAGTGGAAGAAG
TGTTGATGGAATTGTGGTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

81.034

98.305

0.797
  prx Streptococcus pyogenes MGAS8232

79.31

98.305

0.78
  prx Streptococcus pyogenes MGAS315

75.862

98.305

0.746
  prx Streptococcus pyogenes MGAS315

72.414

98.305

0.712
  prx Streptococcus pyogenes MGAS315

92.683

69.492

0.644
  prx Streptococcus pyogenes MGAS315

90.244

69.492

0.627
  prx Streptococcus pyogenes MGAS315

78.049

69.492

0.542