Detailed information NTG0299739

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ETA15_RS03055
• Genome accession: NZ_CP035403
• Coordinates: 590052..591227 (+)
• Length: 391 a.a.
• NCBI ID: WP_129093249.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM103581
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 585052..596227

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ETA15_RS03030 (ETA15_03030)	-	585102..585428 (+)	327	WP_129093244.1	YddF family protein	-
ETA15_RS03035 (ETA15_03035)	-	585432..587873 (+)	2442	WP_129093245.1	CD3337/EF1877 family mobilome membrane protein	-
ETA15_RS03040 (ETA15_03040)	-	587870..588859 (+)	990	WP_129093246.1	bifunctional lytic transglycosylase/C40 family peptidase	-
ETA15_RS03045 (ETA15_03045)	-	588874..589380 (+)	507	WP_129093247.1	hypothetical protein	-
ETA15_RS03050 (ETA15_03050)	-	589434..589826 (+)	393	WP_129093248.1	cystatin-like fold lipoprotein	-
ETA15_RS03055 (ETA15_03055)	rapF	590052..591227 (+)	1176	WP_129093249.1	Rap family tetratricopeptide repeat protein	Regulator
ETA15_RS03060 (ETA15_03060)	-	591555..592187 (+)	633	WP_129093250.1	PBECR4 domain-containing protein	-
ETA15_RS03065 (ETA15_03065)	-	592729..593292 (-)	564	WP_017696997.1	GNAT family protein	-
ETA15_RS03070 (ETA15_03070)	-	593510..593962 (-)	453	WP_017696995.1	SMI1/KNR4 family protein	-
ETA15_RS03075 (ETA15_03075)	-	593975..595723 (-)	1749	Protein_557	T7SS effector LXG polymorphic toxin	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 46397.39 Da
• Isoelectric Point: 4.6370

>NTDB_id=299739 ETA15_RS03055 WP_129093249.1 590052..591227(+) (rapF) [Bacillus subtilis strain SRCM103581]
MRSVFLDKDKIPYDLVTKNLNEWYTSIKNDQVEKAEIIKTEVENELLNMEENQDALLYYQLLEFRHEIMLSYMESKEIDD
LNSAYETIKEIEEQGQLTGMLEYYYYFFKGMYEFRRKELTTAISAYRIAESKLSEVEDEIEKAEFFFKVSYVYYYMKQTY
FSMNYANRALKIFKEYDEYAVQTLRCQFIVAGNYIDSLEYEKALQVFFESLEIAKEINIDHLIGMSHINIGICFDELEEY
TKASRHLELSLEYLEKCNNSFVSKALFILTHVKAKQKNFNLAFEYFKKGKMYSNKNNDNEYAAKFKILEGLYFSNGEYHH
IEDAFTYLESKKLYADVENYAIEVGDYFHQTGDLVLSNQYYRLSIEARQKIKKGEIINENHSDSVGSAGIE

Nucleotide

• Length: 1176 bp

>NTDB_id=299739 ETA15_RS03055 WP_129093249.1 590052..591227(+) (rapF) [Bacillus subtilis strain SRCM103581]
TTGCGGAGTGTTTTCTTAGATAAAGATAAAATTCCGTACGACCTAGTTACAAAAAATCTAAATGAATGGTATACATCAAT
AAAAAATGATCAAGTTGAAAAAGCAGAGATTATAAAAACAGAAGTAGAGAATGAATTACTAAACATGGAAGAAAACCAAG
ATGCATTGTTATATTATCAGCTATTGGAATTTAGGCACGAGATAATGTTAAGTTATATGGAATCAAAGGAAATAGATGAT
TTGAACAGCGCTTATGAGACTATAAAAGAGATTGAAGAGCAAGGGCAATTAACCGGAATGCTGGAATACTATTATTATTT
TTTTAAAGGTATGTATGAATTTAGGCGTAAAGAATTGACTACGGCGATAAGCGCCTATCGAATAGCAGAATCAAAGTTAT
CGGAAGTTGAGGACGAAATAGAAAAAGCAGAGTTTTTTTTCAAAGTGTCCTATGTGTATTATTATATGAAACAAACGTAT
TTCTCTATGAATTATGCAAATCGTGCGTTAAAAATATTTAAAGAGTATGATGAATATGCTGTTCAAACGTTACGGTGTCA
ATTCATTGTTGCCGGAAATTATATTGATTCATTGGAATATGAGAAAGCATTACAAGTTTTTTTTGAATCATTGGAGATAG
CAAAAGAAATAAATATTGATCATTTAATTGGAATGTCTCATATAAATATCGGTATATGTTTTGATGAATTGGAGGAATAT
ACAAAGGCATCCCGTCACTTGGAATTGTCTTTAGAGTATTTAGAAAAATGCAATAATTCATTTGTGTCGAAAGCGTTATT
CATTTTGACACATGTCAAAGCGAAACAGAAGAACTTTAATTTGGCTTTTGAATATTTTAAGAAAGGGAAAATGTATAGTA
ATAAAAATAATGATAATGAATACGCGGCGAAATTCAAAATATTAGAAGGACTTTACTTTTCAAATGGTGAATATCATCAT
ATTGAAGATGCTTTTACTTATCTAGAATCAAAAAAATTGTATGCTGATGTTGAGAATTACGCCATAGAAGTTGGGGATTA
CTTTCACCAAACGGGCGATTTGGTGCTTTCAAACCAATATTATCGTTTAAGCATTGAAGCCAGACAAAAAATAAAAAAAG
GAGAGATTATCAATGAAAATCACTCGGACTCTGTTGGCAGTGCTGGTATTGAGTAG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (10-70)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	39.286	93.095	0.366
rapC	Bacillus subtilis subsp. subtilis str. 168	37.666	96.419	0.363