Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | EQJ84_RS06680 | Genome accession | NZ_CP035191 |
| Coordinates | 1286770..1287906 (+) | Length | 378 a.a. |
| NCBI ID | WP_015252291.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain SRCM104011 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1281770..1292906
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQJ84_RS06660 (EQJ84_06660) | uxaA | 1282218..1283711 (+) | 1494 | WP_103803759.1 | altronate dehydratase family protein | - |
| EQJ84_RS06665 (EQJ84_06665) | yjnA | 1283752..1284516 (-) | 765 | WP_014476525.1 | sulfite exporter TauE/SafE family protein | - |
| EQJ84_RS06670 (EQJ84_06670) | bstD | 1284741..1285205 (-) | 465 | WP_014479541.1 | DinB family protein | - |
| EQJ84_RS06675 (EQJ84_06675) | yjoB | 1285354..1286625 (+) | 1272 | WP_128441566.1 | ATPase YjoB | - |
| EQJ84_RS06680 (EQJ84_06680) | rapC | 1286770..1287906 (+) | 1137 | WP_015252291.1 | response regulator aspartate phosphatase RapA | Regulator |
| EQJ84_RS06685 (EQJ84_06685) | phrA | 1287896..1288030 (+) | 135 | WP_003245487.1 | phosphatase RapA inhibitor PhrA | - |
| EQJ84_RS06690 (EQJ84_06690) | yjpA | 1288061..1288318 (-) | 258 | WP_003232731.1 | YciI family protein | - |
| EQJ84_RS06695 (EQJ84_06695) | xlyB | 1288439..1289392 (+) | 954 | WP_041850941.1 | N-acetylmuramoyl-L-alanine amidase | - |
| EQJ84_RS06700 (EQJ84_06700) | yjqA | 1289432..1289809 (-) | 378 | WP_041850940.1 | PH domain-containing protein | - |
| EQJ84_RS06705 (EQJ84_06705) | pghB | 1289914..1290516 (+) | 603 | WP_038828723.1 | poly-gamma-glutamate hydrolase family protein | - |
| EQJ84_RS06710 (EQJ84_06710) | xpdC | 1290593..1291429 (+) | 837 | WP_003245071.1 | manganese catalase family protein | - |
| EQJ84_RS06715 (EQJ84_06715) | xkdA | 1291473..1292069 (-) | 597 | WP_003232721.1 | ImmA/IrrE family metallo-endopeptidase | - |
| EQJ84_RS06720 (EQJ84_06720) | xre | 1292232..1292573 (-) | 342 | WP_003232719.1 | HTH-type transcriptional regulator Xre | - |
Sequence
Protein
Download Length: 378 a.a. Molecular weight: 45046.23 Da Isoelectric Point: 4.7218
>NTDB_id=294058 EQJ84_RS06680 WP_015252291.1 1286770..1287906(+) (rapC) [Bacillus subtilis strain SRCM104011]
MRMKQTIPSSYVGLKINEWYTHIRQFHVAEAERVKLEVEREIEDMEEDQDLLLYYSLMEFRHRVMLDYIKPFGEDTSQLE
FSELLEDIEGNQYKLTGLLEYYFNFFRGMYEFKQKMFVSAMMYYKRAEKNLALVSDDIEKAEFAFKMAEIFYNLKQTYVS
MSYAVQALETYQMYETYTVRRIQCEFVIAGNYDDMQYPERALPHLELALDLAKKEGNPRLISSALYNLGNCYEKMGELQK
AAEYFEKSVSICKSEKFDNLPHSIYSLTQVLYKQKNDAEAQKKYREGLEIARQYSDELFVELFQFLHALYGKNIDTESVS
HTFQFLEEHMLYPYIEELAHDAAQFYIENGQPEKALSFYEKMVHAQKQIQRGDCLYEI
MRMKQTIPSSYVGLKINEWYTHIRQFHVAEAERVKLEVEREIEDMEEDQDLLLYYSLMEFRHRVMLDYIKPFGEDTSQLE
FSELLEDIEGNQYKLTGLLEYYFNFFRGMYEFKQKMFVSAMMYYKRAEKNLALVSDDIEKAEFAFKMAEIFYNLKQTYVS
MSYAVQALETYQMYETYTVRRIQCEFVIAGNYDDMQYPERALPHLELALDLAKKEGNPRLISSALYNLGNCYEKMGELQK
AAEYFEKSVSICKSEKFDNLPHSIYSLTQVLYKQKNDAEAQKKYREGLEIARQYSDELFVELFQFLHALYGKNIDTESVS
HTFQFLEEHMLYPYIEELAHDAAQFYIENGQPEKALSFYEKMVHAQKQIQRGDCLYEI
Nucleotide
Download Length: 1137 bp
>NTDB_id=294058 EQJ84_RS06680 WP_015252291.1 1286770..1287906(+) (rapC) [Bacillus subtilis strain SRCM104011]
TTGAGGATGAAGCAGACGATTCCGTCCTCTTATGTCGGGCTTAAAATTAATGAATGGTATACTCATATCCGGCAGTTCCA
CGTCGCTGAAGCCGAACGGGTCAAGCTCGAAGTAGAAAGAGAAATTGAGGATATGGAAGAAGACCAAGATTTGCTGCTGT
ATTATTCTTTAATGGAGTTCAGGCATCGTGTCATGCTGGATTACATTAAGCCTTTTGGAGAGGACACGTCGCAGCTAGAG
TTTTCAGAATTATTAGAAGACATCGAAGGGAATCAGTACAAGCTGACAGGGCTTCTCGAATATTACTTTAATTTTTTTCG
AGGAATGTATGAATTTAAGCAGAAGATGTTTGTCAGTGCCATGATGTATTATAAACGGGCAGAAAAGAATCTTGCCCTCG
TCTCGGATGATATTGAGAAAGCCGAGTTTGCTTTTAAAATGGCTGAGATTTTTTACAATTTAAAACAAACCTATGTTTCG
ATGAGCTACGCCGTTCAGGCATTAGAAACATACCAAATGTATGAAACGTACACCGTCCGCAGAATCCAATGTGAATTCGT
TATTGCAGGTAATTATGATGATATGCAGTATCCAGAAAGAGCATTGCCCCACTTAGAACTGGCTTTAGATCTTGCAAAGA
AAGAAGGCAATCCCCGCCTGATCAGTTCCGCCCTGTATAATCTCGGAAACTGCTATGAGAAAATGGGTGAACTGCAAAAG
GCAGCCGAATACTTTGAGAAATCTGTTTCTATTTGCAAGTCGGAAAAGTTCGATAATCTTCCGCATTCTATCTACTCTTT
AACACAAGTTCTGTATAAACAAAAAAATGACGCCGAAGCGCAAAAAAAGTATCGTGAAGGATTGGAAATCGCCCGTCAAT
ACAGTGATGAATTATTTGTGGAGCTTTTTCAATTTTTACATGCGTTATACGGAAAAAACATTGACACAGAATCGGTCTCA
CACACCTTTCAATTTCTTGAAGAACATATGCTGTATCCTTATATTGAAGAGCTGGCGCATGATGCTGCCCAATTCTATAT
AGAAAACGGACAGCCCGAAAAAGCACTTTCATTTTATGAGAAAATGGTGCACGCACAAAAACAAATCCAGAGAGGAGATT
GTTTATATGAAATCTAA
TTGAGGATGAAGCAGACGATTCCGTCCTCTTATGTCGGGCTTAAAATTAATGAATGGTATACTCATATCCGGCAGTTCCA
CGTCGCTGAAGCCGAACGGGTCAAGCTCGAAGTAGAAAGAGAAATTGAGGATATGGAAGAAGACCAAGATTTGCTGCTGT
ATTATTCTTTAATGGAGTTCAGGCATCGTGTCATGCTGGATTACATTAAGCCTTTTGGAGAGGACACGTCGCAGCTAGAG
TTTTCAGAATTATTAGAAGACATCGAAGGGAATCAGTACAAGCTGACAGGGCTTCTCGAATATTACTTTAATTTTTTTCG
AGGAATGTATGAATTTAAGCAGAAGATGTTTGTCAGTGCCATGATGTATTATAAACGGGCAGAAAAGAATCTTGCCCTCG
TCTCGGATGATATTGAGAAAGCCGAGTTTGCTTTTAAAATGGCTGAGATTTTTTACAATTTAAAACAAACCTATGTTTCG
ATGAGCTACGCCGTTCAGGCATTAGAAACATACCAAATGTATGAAACGTACACCGTCCGCAGAATCCAATGTGAATTCGT
TATTGCAGGTAATTATGATGATATGCAGTATCCAGAAAGAGCATTGCCCCACTTAGAACTGGCTTTAGATCTTGCAAAGA
AAGAAGGCAATCCCCGCCTGATCAGTTCCGCCCTGTATAATCTCGGAAACTGCTATGAGAAAATGGGTGAACTGCAAAAG
GCAGCCGAATACTTTGAGAAATCTGTTTCTATTTGCAAGTCGGAAAAGTTCGATAATCTTCCGCATTCTATCTACTCTTT
AACACAAGTTCTGTATAAACAAAAAAATGACGCCGAAGCGCAAAAAAAGTATCGTGAAGGATTGGAAATCGCCCGTCAAT
ACAGTGATGAATTATTTGTGGAGCTTTTTCAATTTTTACATGCGTTATACGGAAAAAACATTGACACAGAATCGGTCTCA
CACACCTTTCAATTTCTTGAAGAACATATGCTGTATCCTTATATTGAAGAGCTGGCGCATGATGCTGCCCAATTCTATAT
AGAAAACGGACAGCCCGAAAAAGCACTTTCATTTTATGAGAAAATGGTGCACGCACAAAAACAAATCCAGAGAGGAGATT
GTTTATATGAAATCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
44.947 |
99.471 |
0.447 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
41.689 |
100 |
0.418 |