Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   EQJ08_RS18975 Genome accession   NZ_CP035167
Coordinates   3671311..3671685 (-) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis strain SRCM104008     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3666311..3676685
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQJ08_RS18950 (EQJ08_18950) - 3666475..3666636 (-) 162 WP_003227632.1 hypothetical protein -
  EQJ08_RS18955 (EQJ08_18955) glpX 3666851..3667816 (-) 966 WP_003242962.1 class II fructose-bisphosphatase -
  EQJ08_RS18960 (EQJ08_18960) murAB 3667847..3669136 (-) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  EQJ08_RS18965 (EQJ08_18965) fsa 3669515..3670153 (-) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  EQJ08_RS18970 (EQJ08_18970) fbaA 3670273..3671130 (-) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  EQJ08_RS18975 (EQJ08_18975) letA 3671311..3671685 (-) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  EQJ08_RS18980 (EQJ08_18980) ywjG 3671851..3672372 (+) 522 WP_003242809.1 DUF2529 domain-containing protein -
  EQJ08_RS18985 (EQJ08_18985) pyrG 3672454..3674061 (-) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  EQJ08_RS18990 (EQJ08_18990) rpoE 3674303..3674827 (-) 525 WP_128441915.1 DNA-directed RNA polymerase subunit delta -
  EQJ08_RS18995 (EQJ08_18995) acdA 3675010..3676149 (-) 1140 WP_128441917.1 acyl-CoA dehydrogenase AcdA -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=293535 EQJ08_RS18975 WP_003227621.1 3671311..3671685(-) (letA) [Bacillus subtilis strain SRCM104008]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=293535 EQJ08_RS18975 WP_003227621.1 3671311..3671685(-) (letA) [Bacillus subtilis strain SRCM104008]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTTTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAGGAATCGAAGGAATTGGGCGCTCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363

Multiple sequence alignment