Detailed information NTG0029302

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: BPUM_RS15450
• Genome accession: NC_009848
• Coordinates: 3082306..3082902 (+)
• Length: 198 a.a.
• NCBI ID: WP_007500118.1
• Uniprot ID: -
• Organism: Bacillus pumilus SAFR-032
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3077306..3087902

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BPUM_RS15420 (BPUM_3096)	nikA	3077386..3079017 (-)	1632	WP_012011341.1	nickel ABC transporter substrate-binding protein	-
BPUM_RS15425 (BPUM_3097)	-	3079141..3080310 (-)	1170	WP_012011342.1	macrolide family glycosyltransferase	-
BPUM_RS15430 (BPUM_3098)	-	3080554..3081105 (-)	552	WP_012011343.1	hypothetical protein	-
BPUM_RS15445 (BPUM_3100)	-	3081773..3082078 (-)	306	WP_012011345.1	TM2 domain-containing protein	-
BPUM_RS15450 (BPUM_3102)	clpP	3082306..3082902 (+)	597	WP_007500118.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
BPUM_RS15455 (BPUM_3103)	-	3082962..3083540 (-)	579	WP_041815945.1	TIGR00730 family Rossman fold protein	-
BPUM_RS15460 (BPUM_3104)	-	3083678..3084007 (+)	330	WP_012011348.1	MazG nucleotide pyrophosphohydrolase domain-containing protein	-
BPUM_RS15465 (BPUM_3105)	-	3084036..3085658 (-)	1623	WP_012011349.1	SulP family inorganic anion transporter	-
BPUM_RS15470 (BPUM_3106)	-	3085696..3086277 (-)	582	WP_041816352.1	beta-class carbonic anhydrase	-
BPUM_RS15475 (BPUM_3108)	-	3086831..3087802 (+)	972	WP_012011352.1	2-hydroxyacid dehydrogenase	-

Sequence

Protein

• Length: 198 a.a.
• Molecular weight: 21846.03 Da
• Isoelectric Point: 4.6905

>NTDB_id=29302 BPUM_RS15450 WP_007500118.1 3082306..3082902(+) (clpP) [Bacillus pumilus SAFR-032]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLAERTGQ
PIEVIERDTDRDNFKTAEEALQYGLIDKVLTRNTEEQK

Nucleotide

• Length: 597 bp

>NTDB_id=29302 BPUM_RS15450 WP_007500118.1 3082306..3082902(+) (clpP) [Bacillus pumilus SAFR-032]
ATGAATTTAATACCTACAGTCATTGAACAAACAAATCGTGGGGAAAGAGCTTACGACATTTATTCTCGTCTTTTAAAAGA
CCGTATTATCATGCTTGGTTCTGCGATCGATGACAATGTTGCCAACTCCATCGTGTCACAGCTGCTTTTCTTAGAAGCTG
AAGATCCAGAAAAAGATATTTCTATCTACATTAACAGCCCTGGCGGTTCAATCACAGCTGGTATGGCCATTTACGATACG
ATGCAATTTATTAAACCAAAGGTATCAACCATTTGTATTGGTATGGCTGCATCTATGGGTGCGTTCCTGCTTGCTGCTGG
TGAAAAAGGTAAGCGTTATGCCCTTCCAAACAGTGAAGTCATGATTCACCAACCACTAGGTGGTGCCCAAGGTCAAGCAA
CAGAAATTGAAATTGCGGCAAAACGAATCCTTTCTTTACGCGATAAACTGAACCAAGTACTTGCTGAACGTACTGGTCAG
CCAATTGAAGTCATTGAGCGCGATACAGATCGTGACAACTTCAAAACAGCGGAAGAAGCACTTCAATACGGACTCATTGA
CAAAGTCTTGACCCGTAATACAGAAGAACAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	93.434	100	0.934
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.539	96.465	0.652
clpP	Streptococcus thermophilus LMG 18311	58.549	97.475	0.571
clpP	Streptococcus thermophilus LMD-9	58.549	97.475	0.571
clpP	Lactococcus lactis subsp. cremoris KW2	56.186	97.98	0.551
clpP	Streptococcus pneumoniae Rx1	55.67	97.98	0.545
clpP	Streptococcus pneumoniae D39	55.67	97.98	0.545
clpP	Streptococcus pneumoniae R6	55.67	97.98	0.545
clpP	Streptococcus pneumoniae TIGR4	55.67	97.98	0.545
clpP	Streptococcus pyogenes JRS4	55.44	97.475	0.54
clpP	Streptococcus pyogenes MGAS315	55.44	97.475	0.54
clpP	Streptococcus mutans UA159	54.639	97.98	0.535
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	54.124	97.98	0.53