Detailed information NTG0292599

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: DJ572_RS17275
• Genome accession: NZ_CP029461
• Coordinates: 3318527..3319120 (+)
• Length: 197 a.a.
• NCBI ID: WP_003228214.1
• Uniprot ID: A0A199WEF2
• Organism: Bacillus subtilis strain QB61
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3313527..3324120

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DJ572_RS17245 (DJ572_17145)	psmA	3313781..3314116 (+)	336	WP_038429685.1	SMR family transporter	-
DJ572_RS17250 (DJ572_17150)	psmB	3314116..3314436 (+)	321	WP_003228222.1	QacE family quaternary ammonium compound efflux SMR transporter	-
DJ572_RS17255 (DJ572_17155)	yvdQ	3314472..3314984 (-)	513	WP_003243249.1	DUF3231 family protein	-
DJ572_RS17260 (DJ572_17160)	cotNP	3315236..3316579 (-)	1344	WP_029725961.1	FAD-binding oxidoreductase	-
DJ572_RS17265 (DJ572_17165)	cotR	3316936..3317898 (+)	963	WP_029725962.1	sporulation hydrolase CotR	-
DJ572_RS17275 (DJ572_17175)	clpP	3318527..3319120 (+)	594	WP_003228214.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
DJ572_RS17280 (DJ572_17180)	pgmB	3319183..3319857 (-)	675	WP_038429687.1	beta-phosphoglucomutase	-
DJ572_RS17285 (DJ572_17185)	malL	3319854..3321539 (-)	1686	WP_038429689.1	oligo-1,6-glucosidase	-
DJ572_RS17290 (DJ572_17190)	mdxK	3321532..3323805 (-)	2274	WP_038429690.1	maltose phosphorylase	-

Sequence

Protein

• Length: 197 a.a.
• Molecular weight: 21682.00 Da
• Isoelectric Point: 4.9416

>NTDB_id=292599 DJ572_RS17275 WP_003228214.1 3318527..3319120(+) (clpP) [Bacillus subtilis strain QB61]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEALEYGLIDKILTHTEDKK

Nucleotide

• Length: 594 bp

>NTDB_id=292599 DJ572_RS17275 WP_003228214.1 3318527..3319120(+) (clpP) [Bacillus subtilis strain QB61]
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGCGTATGACATTTATTCTCGTCTATTAAAGGA
TCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCTTAGCAGCAG
AAGACCCTGAAAAAGAAATTTCTCTTTATATCAACAGCCCGGGCGGCTCTATTACAGCCGGTATGGCGATCTATGATACC
ATGCAGTTTATTAAGCCGAAGGTATCTACAATTTGTATCGGTATGGCTGCGTCAATGGGCGCGTTCCTGCTTGCAGCCGG
CGAAAAAGGCAAACGCTATGCGCTTCCAAACAGTGAAGTCATGATTCACCAGCCACTTGGCGGTGCGCAAGGTCAGGCGA
CAGAAATTGAAATTGCCGCTAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTCCTTGCTGAACGTACTGGCCAG
CCGCTTGAAGTGATCGAACGCGACACAGACCGTGATAACTTCAAGTCTGCTGAAGAAGCGCTTGAATACGGCCTGATTGA
CAAAATTTTGACTCACACAGAAGACAAAAAGTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

3D structure

• AlphaFold DB: A0A199WEF2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	100	100	1
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	68.617	95.431	0.655
clpP	Streptococcus thermophilus LMG 18311	58.163	99.492	0.579
clpP	Streptococcus thermophilus LMD-9	58.163	99.492	0.579
clpP	Streptococcus pneumoniae D39	57.812	97.462	0.563
clpP	Streptococcus pneumoniae Rx1	57.812	97.462	0.563
clpP	Streptococcus pneumoniae R6	57.812	97.462	0.563
clpP	Streptococcus pneumoniae TIGR4	57.812	97.462	0.563
clpP	Lactococcus lactis subsp. cremoris KW2	57.895	96.447	0.558
clpP	Streptococcus pyogenes JRS4	56.122	99.492	0.558
clpP	Streptococcus pyogenes MGAS315	56.122	99.492	0.558
clpP	Streptococcus mutans UA159	54.822	100	0.548
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	55.789	96.447	0.538