Detailed information NTG0292279

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: DF184_RS07045
• Genome accession: NZ_CP029398
• Coordinates: 1410274..1410885 (-)
• Length: 203 a.a.
• NCBI ID: WP_223375679.1
• Uniprot ID: -
• Organism: Streptococcus suis strain HN105
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1405274..1415885

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DF184_RS07020 (DF184_07020)	-	1405772..1406536 (-)	765	WP_002937291.1	ABC transporter ATP-binding protein	-
DF184_RS07025 (DF184_07025)	-	1406536..1407483 (-)	948	WP_002937293.1	branched-chain amino acid ABC transporter permease	-
DF184_RS07030 (DF184_07030)	-	1407486..1408373 (-)	888	WP_004298925.1	branched-chain amino acid ABC transporter permease	-
DF184_RS07035 (DF184_07035)	-	1408574..1409743 (-)	1170	WP_044668681.1	ABC transporter substrate-binding protein	-
DF184_RS07040 (DF184_07040)	-	1409875..1410147 (-)	273	WP_109371668.1	YlbG family protein	-
DF184_RS07045 (DF184_07045)	clpP	1410274..1410885 (-)	612	WP_223375679.1	ATP-dependent Clp protease proteolytic subunit	Regulator
DF184_RS07050 (DF184_07050)	upp	1410981..1411610 (-)	630	WP_012027487.1	uracil phosphoribosyltransferase	-
DF184_RS07055 (DF184_07055)	-	1411690..1413306 (-)	1617	WP_109371670.1	alpha-glucosidase	-
DF184_RS07060 (DF184_07060)	gtfA	1413379..1414827 (-)	1449	WP_109371672.1	sucrose phosphorylase	-
DF184_RS07065 (DF184_07065)	-	1414897..1415727 (-)	831	WP_009910491.1	carbohydrate ABC transporter permease	-

Sequence

Protein

• Length: 203 a.a.
• Molecular weight: 22345.73 Da
• Isoelectric Point: 6.7324

>NTDB_id=292279 DF184_RS07045 WP_223375679.1 1410274..1410885(-) (clpP) [Streptococcus suis strain HN105]
MSKRSNFMIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDPTKDIYLYVNTPGGSVSAGL
AIVDTMNFIKADVQTIVMGTAASMGTIIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNKLEKI
LADNSGKTVKQIHKDAERDYWMSAEETLAYGFIDQIMDNTKVK

Nucleotide

• Length: 612 bp

>NTDB_id=292279 DF184_RS07045 WP_223375679.1 1410274..1410885(-) (clpP) [Streptococcus suis strain HN105]
ATCTCGAAAAGGAGTAATTTTATGATTCCAGTAGTTATTGAACAAACTAGCCGTGGTGAGCGCTCGTATGATATTTATTC
CCGTTTGCTCAAGGATCGCATTATCATGTTGACAGGACCAGTTGAGGACAACATGGCTAATTCGATTATTGCACAATTGC
TTTTCCTTGATGCCCAAGATCCTACAAAGGATATTTACCTCTATGTTAATACGCCAGGAGGATCGGTGTCAGCAGGTCTT
GCCATTGTAGACACGATGAATTTCATTAAAGCTGATGTTCAAACCATCGTTATGGGAACAGCTGCGAGCATGGGAACCAT
CATTGCATCAAGCGGAGCCAAGGGCAAACGTTTCATGTTGCCAAATGCAGAGTACATGATTCACCAACCGATGGGTGGAA
CAGGTGGTGGCACTCAGCAAACAGACATGGCTATTGCAGCAGAGCACCTATTAAAAACACGTAATAAGTTAGAAAAAATC
TTGGCAGACAATTCAGGTAAGACAGTCAAGCAAATCCATAAGGATGCAGAACGTGATTACTGGATGTCAGCAGAAGAAAC
CTTGGCTTACGGATTTATTGACCAGATTATGGACAATACAAAAGTCAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (18-199)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes JRS4	92.347	96.552	0.892
clpP	Streptococcus pyogenes MGAS315	92.347	96.552	0.892
clpP	Streptococcus mutans UA159	90.306	96.552	0.872
clpP	Streptococcus thermophilus LMD-9	88.776	96.552	0.857
clpP	Streptococcus thermophilus LMG 18311	88.776	96.552	0.857
clpP	Streptococcus pneumoniae R6	89.231	96.059	0.857
clpP	Streptococcus pneumoniae Rx1	89.231	96.059	0.857
clpP	Streptococcus pneumoniae D39	89.231	96.059	0.857
clpP	Streptococcus pneumoniae TIGR4	89.231	96.059	0.857
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	83.756	97.044	0.813
clpP	Lactococcus lactis subsp. cremoris KW2	83.249	97.044	0.808
clpP	Bacillus subtilis subsp. subtilis str. 168	58.163	96.552	0.562
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.549	95.074	0.557