Detailed information NTG0291879

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: DIW83_RS01495
• Genome accession: NZ_CP029351
• Coordinates: 312380..313438 (+)
• Length: 352 a.a.
• NCBI ID: WP_004711654.1
• Uniprot ID: A0AAV3IQ41
• Organism: Acinetobacter nosocomialis strain NCTC 8102
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 307380..318438

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DIW83_RS01480 (DIW83_01480)	-	308483..308815 (+)	333	WP_016803755.1	hypothetical protein	-
DIW83_RS01485 (DIW83_01485)	-	308818..309642 (+)	825	WP_100222400.1	putative RNA methyltransferase	-
DIW83_RS01490 (DIW83_01490)	ponA	309660..312218 (-)	2559	WP_016803753.1	penicillin-binding protein PBP1a	-
DIW83_RS01495 (DIW83_01495)	comM	312380..313438 (+)	1059	WP_004711654.1	pilus assembly protein PilM	Machinery gene
DIW83_RS01500 (DIW83_01500)	pilN	313438..314082 (+)	645	WP_006581060.1	PilN domain-containing protein	Machinery gene
DIW83_RS01505 (DIW83_01505)	pilO	314079..314819 (+)	741	WP_016803752.1	type 4a pilus biogenesis protein PilO	Machinery gene
DIW83_RS01510 (DIW83_01510)	pilP	314830..315357 (+)	528	WP_006582542.1	pilus assembly protein PilP	Machinery gene
DIW83_RS01515 (DIW83_01515)	pilQ	315420..317585 (+)	2166	WP_016803751.1	type IV pilus secretin PilQ family protein	Machinery gene
DIW83_RS01520 (DIW83_01520)	aroK	317597..318166 (+)	570	WP_002051689.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39065.66 Da
• Isoelectric Point: 4.4177

>NTDB_id=291879 DIW83_RS01495 WP_004711654.1 312380..313438(+) (comM) [Acinetobacter nosocomialis strain NCTC 8102]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTNAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLLNPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRTLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=291879 DIW83_RS01495 WP_004711654.1 312380..313438(+) (comM) [Acinetobacter nosocomialis strain NCTC 8102]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGCGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCTGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCGGTAGCAGAAGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTAATGCTGCAATT
GCTGTTCCAACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGTGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTACATACCGTTCCCGCTGGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCTGATCGCTTGC
TGAATCCAAATCGAGTAAATGTTCTTTTGGTCGCAACAAGAACGGAAAACGTTGAAACACGTGTTGAAGTTCTTGAATTG
GCAGATTTGAATCCTAAACTGGCAGATGTCGAGAGTTATGCAGTCGAACGTGCTTTTAGTGTGTTTGCTGATAGCTTGCC
GATGGGCGCAAATACGATAGGAATTTTAGATATCGGCCATACCATGACAACACTATCGGTCATGCAAAATGGCAAGATTA
TTTATACTCGTGAGCAGGTTTTTGGCGGTAAGCAACTTACGCTTGAAATTCAAAGTCGTTATGGCCTCTCTCTAGAAGAA
GCAAGCCGAGCTAAAAAAGACCGTACTTTGCCAGACGATTATGAAATTGAGGTACTAGATCCATTTCTAGATGCTGTGGT
TCAGCAGGCGGCCCGCTCATTACAATTCTTCTTTTCTTCATCTCAGTTTAACGAAATAGACCATATTTTGCTTGCAGGTG
GCAATGCGAATATTCCAGGTCTTGCCAAGCTTTTGCAGCAAAAATTAGGCTACCGTGTCACTATTGCCAACCCATTTTTA
CAAATGGGTTTTTCTCCTCAAGTCGACGTTCAAAAAATCGAAAATGATGCTTCATCTTTAATGGTGGCATGCGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	100	100	1
pilM	Acinetobacter baumannii D1279779	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	42.373	100	0.426