Detailed information NTG0291880

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: EMO94_RS03190
• Genome accession: NZ_CP035005
• Coordinates: 583877..585151 (-)
• Length: 424 a.a.
• NCBI ID: WP_000102740.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain PCFH-226
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 578877..590151

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EMO94_RS03165	hisS	579438..580700 (+)	1263	WP_000590826.1	histidine--tRNA ligase	-
EMO94_RS03170	aspS	580716..582482 (+)	1767	WP_000044794.1	aspartate--tRNA ligase	-
EMO94_RS03180	-	582815..582943 (+)	129	WP_014937034.1	hypothetical protein	-
EMO94_RS03185	-	582943..583716 (+)	774	WP_000682648.1	ThiF family adenylyltransferase	-
EMO94_RS03190	rarA	583877..585151 (-)	1275	WP_000102740.1	replication-associated recombination protein A	Machinery gene
EMO94_RS03195	-	585236..585658 (+)	423	WP_000704122.1	Rrf2 family transcriptional regulator	-
EMO94_RS03200	-	585758..585940 (+)	183	WP_000752909.1	CsbD family protein	-
EMO94_RS03205	-	585980..586126 (+)	147	WP_000009235.1	SAS049 family protein	-
EMO94_RS03210	-	586363..587376 (-)	1014	WP_000985891.1	LLM class flavin-dependent oxidoreductase	-
EMO94_RS03215	-	587687..588829 (+)	1143	WP_000409167.1	cysteine desulfurase family protein	-
EMO94_RS03220	mnmA	588830..589948 (+)	1119	WP_000066097.1	tRNA 2-thiouridine(34) synthase MnmA	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47264.84 Da
• Isoelectric Point: 8.3539

>NTDB_id=291880 EMO94_RS03190 WP_000102740.1 583877..585151(-) (rarA) [Staphylococcus aureus strain PCFH-226]
MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDEENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=291880 EMO94_RS03190 WP_000102740.1 583877..585151(-) (rarA) [Staphylococcus aureus strain PCFH-226]
GTGAGTACAGAACCATTAGCGTCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACACTTAGTTGGACC
AAGAGGCATTATCAGAAGAATGGTTGACACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACACAATATAAATTTAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTATTAGATGAAATCCATCGACTAGATAAAGC
CAAACAAGATTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTAATCGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTCGAGTTATATCCTTTAAATGACGAAGATGTTCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGAAGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCTATGACCTACTTTTC
TACACAAAGTCAAGGTGATGTTCGTAGTGCGCTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAGGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGCTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATCCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGCCAAATTCCAAACCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTTAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAATTTACTTAAACAAAGGCCATAA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

• AAA C-terminal domain (AAA_assoc_2) (175-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	69.286	99.057	0.686