Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | C1A39_RS01830 | Genome accession | NZ_CP028896 |
| Coordinates | 335033..335623 (+) | Length | 196 a.a. |
| NCBI ID | WP_002949732.1 | Uniprot ID | Q5M5U4 |
| Organism | Streptococcus thermophilus strain CS5 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 330033..340623
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1A39_RS01800 (C1A39_01820) | - | 330412..331005 (+) | 594 | Protein_306 | cation-translocating P-type ATPase C-terminal domain-containing protein | - |
| C1A39_RS01805 (C1A39_01825) | - | 331309..332403 (+) | 1095 | WP_002946733.1 | cystathionine gamma-synthase | - |
| C1A39_RS01810 (C1A39_01830) | - | 332414..333577 (+) | 1164 | WP_011680761.1 | MalY/PatB family protein | - |
| C1A39_RS01815 (C1A39_01835) | - | 333653..333820 (+) | 168 | WP_011680762.1 | hypothetical protein | - |
| C1A39_RS01820 (C1A39_01840) | - | 333861..334136 (+) | 276 | WP_024704192.1 | hypothetical protein | - |
| C1A39_RS01825 (C1A39_01845) | upp | 334266..334895 (+) | 630 | WP_002946740.1 | uracil phosphoribosyltransferase | - |
| C1A39_RS01830 (C1A39_01850) | clpP | 335033..335623 (+) | 591 | WP_002949732.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| C1A39_RS01835 (C1A39_01855) | - | 335710..336159 (+) | 450 | WP_011680764.1 | YlbF family regulator | - |
| C1A39_RS01840 (C1A39_01860) | - | 336152..336433 (+) | 282 | WP_002949736.1 | YlbG family protein | - |
| C1A39_RS01845 (C1A39_01865) | - | 336590..337765 (+) | 1176 | WP_011680765.1 | ABC transporter substrate-binding protein | - |
| C1A39_RS01850 (C1A39_01870) | - | 337809..338693 (+) | 885 | WP_011225509.1 | branched-chain amino acid ABC transporter permease | - |
| C1A39_RS01855 (C1A39_01875) | - | 338697..339647 (+) | 951 | WP_011225510.1 | branched-chain amino acid ABC transporter permease | - |
| C1A39_RS01860 (C1A39_01880) | - | 339650..340414 (+) | 765 | WP_002949740.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21577.62 Da Isoelectric Point: 4.4829
>NTDB_id=288275 C1A39_RS01830 WP_002949732.1 335033..335623(+) (clpP) [Streptococcus thermophilus strain CS5]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPIEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNNLEQILADNSGQ
PIEKVHVDAERDNWMSAQETLEYGFIDEIMTNNQLK
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPIEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNNLEQILADNSGQ
PIEKVHVDAERDNWMSAQETLEYGFIDEIMTNNQLK
Nucleotide
Download Length: 591 bp
>NTDB_id=288275 C1A39_RS01830 WP_002949732.1 335033..335623(+) (clpP) [Streptococcus thermophilus strain CS5]
ATGATTCCGGTAGTTATTGAACAAACATCACGTGGTGAACGTTCTTATGACATTTACTCACGTTTGCTCAAGGATCGTAT
TATCATGTTAACAGGTCCTATAGAAGATAATATGGCAAACTCAATTATCGCTCAACTCTTGTTCTTGGATGCTCAAGACA
ATACAAAAGATATCTATCTGTATGTTAATACACCTGGTGGGTCAGTTTCAGCAGGCCTTGCCATTGTTGATACAATGAAC
TTCATCAAGTCTGATGTTCAAACCATCGTTATGGGGATGGCAGCATCAATGGGTACAATTATCGCTTCAAGCGGTACCAA
AGGTAAACGTTTCATGTTGCCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACTGGTGGTGGTACTCAACAAA
CAGATATGGCTATCGCTGCTGAACACTTGCTCAAGACTCGTAATAACTTGGAGCAAATCTTGGCTGATAATTCTGGTCAG
CCAATTGAAAAGGTTCATGTCGATGCTGAACGTGATAATTGGATGAGTGCCCAAGAAACACTTGAATATGGCTTCATTGA
TGAAATCATGACCAACAACCAATTAAAATAA
ATGATTCCGGTAGTTATTGAACAAACATCACGTGGTGAACGTTCTTATGACATTTACTCACGTTTGCTCAAGGATCGTAT
TATCATGTTAACAGGTCCTATAGAAGATAATATGGCAAACTCAATTATCGCTCAACTCTTGTTCTTGGATGCTCAAGACA
ATACAAAAGATATCTATCTGTATGTTAATACACCTGGTGGGTCAGTTTCAGCAGGCCTTGCCATTGTTGATACAATGAAC
TTCATCAAGTCTGATGTTCAAACCATCGTTATGGGGATGGCAGCATCAATGGGTACAATTATCGCTTCAAGCGGTACCAA
AGGTAAACGTTTCATGTTGCCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACTGGTGGTGGTACTCAACAAA
CAGATATGGCTATCGCTGCTGAACACTTGCTCAAGACTCGTAATAACTTGGAGCAAATCTTGGCTGATAATTCTGGTCAG
CCAATTGAAAAGGTTCATGTCGATGCTGAACGTGATAATTGGATGAGTGCCCAAGAAACACTTGAATATGGCTTCATTGA
TGAAATCATGACCAACAACCAATTAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus thermophilus LMG 18311 |
100 |
100 |
1 |
| clpP | Streptococcus thermophilus LMD-9 |
100 |
100 |
1 |
| clpP | Streptococcus pneumoniae D39 |
92.821 |
99.49 |
0.923 |
| clpP | Streptococcus pneumoniae R6 |
92.821 |
99.49 |
0.923 |
| clpP | Streptococcus pneumoniae TIGR4 |
92.821 |
99.49 |
0.923 |
| clpP | Streptococcus pneumoniae Rx1 |
92.821 |
99.49 |
0.923 |
| clpP | Streptococcus pyogenes MGAS315 |
89.796 |
100 |
0.898 |
| clpP | Streptococcus pyogenes JRS4 |
89.796 |
100 |
0.898 |
| clpP | Streptococcus mutans UA159 |
87.755 |
100 |
0.878 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
87.245 |
100 |
0.872 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
86.735 |
100 |
0.867 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
59.184 |
100 |
0.592 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
58.549 |
98.469 |
0.577 |