Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | BCER98_RS09835 | Genome accession | NC_009674 |
| Coordinates | 2023524..2024105 (-) | Length | 193 a.a. |
| NCBI ID | WP_041809745.1 | Uniprot ID | - |
| Organism | Bacillus cytotoxicus NVH 391-98 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2018524..2029105
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BCER98_RS09810 (Bcer98_1905) | - | 2018840..2019682 (+) | 843 | WP_012094385.1 | oxidoreductase | - |
| BCER98_RS09815 (Bcer98_1906) | - | 2019836..2020132 (-) | 297 | WP_012094386.1 | helix-turn-helix transcriptional regulator | - |
| BCER98_RS09820 (Bcer98_1907) | - | 2020398..2021237 (-) | 840 | WP_012094387.1 | proline/glycine betaine ABC transporter permease | - |
| BCER98_RS09825 (Bcer98_1908) | - | 2021230..2022435 (-) | 1206 | WP_012094388.1 | glycine betaine/L-proline ABC transporter ATP-binding protein | - |
| BCER98_RS09830 (Bcer98_1909) | - | 2022612..2023469 (+) | 858 | WP_012094389.1 | glycine betaine ABC transporter substrate-binding protein | - |
| BCER98_RS09835 (Bcer98_1910) | clpP | 2023524..2024105 (-) | 582 | WP_041809745.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| BCER98_RS09840 (Bcer98_1911) | - | 2024127..2024810 (-) | 684 | WP_012094391.1 | RNA polymerase subunit sigma-70 | - |
| BCER98_RS09845 (Bcer98_1912) | - | 2024957..2025277 (+) | 321 | WP_012094392.1 | 2Fe-2S iron-sulfur cluster-binding protein | - |
| BCER98_RS23370 (Bcer98_1913) | rpiA | 2025294..2025958 (+) | 665 | Protein_1954 | ribose 5-phosphate isomerase A | - |
| BCER98_RS09850 (Bcer98_1914) | - | 2026146..2026583 (+) | 438 | WP_012094393.1 | GNAT family N-acetyltransferase | - |
| BCER98_RS09855 (Bcer98_1915) | - | 2026841..2027188 (-) | 348 | Protein_1956 | GNAT family N-acetyltransferase | - |
| BCER98_RS09860 (Bcer98_1916) | - | 2027323..2027646 (-) | 324 | WP_041810383.1 | DUF952 domain-containing protein | - |
| BCER98_RS09865 (Bcer98_1917) | - | 2027683..2028030 (-) | 348 | WP_012094395.1 | hypothetical protein | - |
| BCER98_RS09870 (Bcer98_1918) | - | 2028184..2028885 (-) | 702 | WP_012094396.1 | carboxylesterase | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21202.48 Da Isoelectric Point: 5.0724
>NTDB_id=28645 BCER98_RS09835 WP_041809745.1 2023524..2024105(-) (clpP) [Bacillus cytotoxicus NVH 391-98]
MNTIPYVVEQTKLGERSYDIYSRLLKDRIVMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGLAASFGALLLLSGTKGKRFALPNSEIMIHQPLGGAKGQATEIEITAKRILKLKQDINNIISDRTGQ
PIEKVARDTERDYFMTAEEAKTYGIVDAVITKK
MNTIPYVVEQTKLGERSYDIYSRLLKDRIVMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGLAASFGALLLLSGTKGKRFALPNSEIMIHQPLGGAKGQATEIEITAKRILKLKQDINNIISDRTGQ
PIEKVARDTERDYFMTAEEAKTYGIVDAVITKK
Nucleotide
Download Length: 582 bp
>NTDB_id=28645 BCER98_RS09835 WP_041809745.1 2023524..2024105(-) (clpP) [Bacillus cytotoxicus NVH 391-98]
ATGAATACAATTCCATATGTTGTGGAACAAACAAAGTTAGGAGAACGCTCCTATGATATATATTCTAGATTATTAAAAGA
TCGTATTGTGATGATTGGTTCAGAAATTAATGATCAAGTTGCAAGTAGTGTAGTGGCGCAGTTATTGTTTTTAGAAGCAG
AAGATGCAGAAAAAGATATTTTTCTTTATATTAATAGTCCAGGTGGTTCGACGACAGCAGGATTTGCGATTTTAGATACA
ATGAACTTGATTAAGCCAGATGTACAAACGCTTTGTATGGGCTTGGCAGCATCATTTGGGGCACTTTTGTTGCTTAGCGG
AACAAAAGGAAAACGATTTGCGCTCCCAAATAGTGAAATTATGATTCACCAGCCGCTTGGCGGAGCAAAAGGGCAAGCGA
CAGAGATTGAAATAACAGCAAAGCGGATATTAAAGTTAAAACAAGATATTAACAATATTATATCTGACCGAACAGGGCAA
CCAATTGAAAAAGTAGCGCGTGATACAGAAAGAGATTACTTTATGACGGCAGAAGAAGCAAAAACATACGGGATTGTTGA
TGCGGTTATTACAAAAAAATAA
ATGAATACAATTCCATATGTTGTGGAACAAACAAAGTTAGGAGAACGCTCCTATGATATATATTCTAGATTATTAAAAGA
TCGTATTGTGATGATTGGTTCAGAAATTAATGATCAAGTTGCAAGTAGTGTAGTGGCGCAGTTATTGTTTTTAGAAGCAG
AAGATGCAGAAAAAGATATTTTTCTTTATATTAATAGTCCAGGTGGTTCGACGACAGCAGGATTTGCGATTTTAGATACA
ATGAACTTGATTAAGCCAGATGTACAAACGCTTTGTATGGGCTTGGCAGCATCATTTGGGGCACTTTTGTTGCTTAGCGG
AACAAAAGGAAAACGATTTGCGCTCCCAAATAGTGAAATTATGATTCACCAGCCGCTTGGCGGAGCAAAAGGGCAAGCGA
CAGAGATTGAAATAACAGCAAAGCGGATATTAAAGTTAAAACAAGATATTAACAATATTATATCTGACCGAACAGGGCAA
CCAATTGAAAAAGTAGCGCGTGATACAGAAAGAGATTACTTTATGACGGCAGAAGAAGCAAAAACATACGGGATTGTTGA
TGCGGTTATTACAAAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
67.539 |
98.964 |
0.668 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.196 |
97.927 |
0.658 |
| clpP | Streptococcus thermophilus LMG 18311 |
56.771 |
99.482 |
0.565 |
| clpP | Streptococcus thermophilus LMD-9 |
56.771 |
99.482 |
0.565 |
| clpP | Streptococcus pneumoniae R6 |
54.167 |
99.482 |
0.539 |
| clpP | Streptococcus pneumoniae D39 |
54.167 |
99.482 |
0.539 |
| clpP | Streptococcus pneumoniae TIGR4 |
54.167 |
99.482 |
0.539 |
| clpP | Streptococcus pneumoniae Rx1 |
54.167 |
99.482 |
0.539 |
| clpP | Streptococcus pyogenes MGAS315 |
55.026 |
97.927 |
0.539 |
| clpP | Streptococcus pyogenes JRS4 |
55.026 |
97.927 |
0.539 |
| clpP | Streptococcus mutans UA159 |
54.497 |
97.927 |
0.534 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
52.91 |
97.927 |
0.518 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
51.323 |
97.927 |
0.503 |