Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   EHF40_RS06510 Genome accession   NZ_CP033907
Coordinates   1246295..1246477 (-) Length   60 a.a.
NCBI ID   WP_011528776.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain Duke-Large     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1241295..1251477
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EHF40_RS06495 (EHF40_06495) - 1241733..1242428 (-) 696 WP_002983928.1 phosphoglycerate mutase -
  EHF40_RS06500 (EHF40_06500) - 1242667..1243602 (+) 936 WP_021299339.1 dihydroorotate oxidase -
  EHF40_RS06505 (EHF40_06505) - 1243902..1245764 (-) 1863 WP_011528775.1 heavy metal translocating P-type ATPase -
  EHF40_RS06510 (EHF40_06510) prx 1246295..1246477 (-) 183 WP_011528776.1 hypothetical protein Regulator
  EHF40_RS06515 (EHF40_06515) entC3 1246590..1247372 (-) 783 WP_002988472.1 enterotoxin type C3 EntC3 -
  EHF40_RS06520 (EHF40_06520) - 1247620..1248744 (-) 1125 WP_002988467.1 Fic family protein -
  EHF40_RS06525 (EHF40_06525) - 1248880..1250097 (-) 1218 WP_011528778.1 peptidoglycan amidohydrolase family protein -
  EHF40_RS06530 (EHF40_06530) - 1250216..1250443 (-) 228 WP_003058873.1 phage holin -
  EHF40_RS06535 (EHF40_06535) - 1250440..1250712 (-) 273 WP_011017397.1 hypothetical protein -
  EHF40_RS06540 (EHF40_06540) - 1250724..1251356 (-) 633 WP_011528779.1 hypothetical protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6840.81 Da        Isoelectric Point: 4.7023

>NTDB_id=285834 EHF40_RS06510 WP_011528776.1 1246295..1246477(-) (prx) [Streptococcus pyogenes strain Duke-Large]
MLTYNEFKQAIDNGYIAGDTVAIVRKDGQIFDYVLPHEKVKNGEVVTKEKVEEVLVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=285834 EHF40_RS06510 WP_011528776.1 1246295..1246477(-) (prx) [Streptococcus pyogenes strain Duke-Large]
ATGCTAACATACAACGAGTTTAAGCAAGCGATTGACAATGGATATATCGCAGGCGATACAGTAGCGATCGTGCGTAAAGA
CGGACAGATTTTTGATTATGTGTTGCCACATGAGAAAGTAAAGAATGGAGAAGTTGTGACTAAGGAAAAAGTGGAAGAGG
TGCTGGTGGAGCTTTCGAGATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS8232

98.333

100

0.983
  prx Streptococcus pyogenes MGAS315

83.333

100

0.833
  prx Streptococcus pyogenes MGAS315

78.333

100

0.783
  prx Streptococcus pyogenes MGAS315

71.667

100

0.717
  prx Streptococcus pyogenes MGAS315

87.805

68.333

0.6
  prx Streptococcus pyogenes MGAS315

81.395

71.667

0.583
  prx Streptococcus pyogenes MGAS315

76.19

70

0.533