Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   EHF40_RS04700 Genome accession   NZ_CP033907
Coordinates   866860..867048 (+) Length   62 a.a.
NCBI ID   WP_011528571.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain Duke-Large     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 861860..872048
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EHF40_RS04665 (EHF40_04665) - 861995..862759 (+) 765 WP_011054797.1 CHAP domain-containing protein -
  EHF40_RS04670 (EHF40_04670) - 862771..863373 (+) 603 WP_011054796.1 hypothetical protein -
  EHF40_RS04675 (EHF40_04675) - 863384..864157 (+) 774 WP_011528569.1 hypothetical protein -
  EHF40_RS04680 (EHF40_04680) - 864167..864388 (+) 222 WP_009880241.1 hypothetical protein -
  EHF40_RS04685 (EHF40_04685) - 864388..865047 (+) 660 WP_011528570.1 hypothetical protein -
  EHF40_RS04690 (EHF40_04690) - 865116..865550 (-) 435 WP_011017966.1 hypothetical protein -
  EHF40_RS04695 (EHF40_04695) sda3 865822..866622 (-) 801 WP_011285611.1 streptodornase Sda3 -
  EHF40_RS04700 (EHF40_04700) prx 866860..867048 (+) 189 WP_011528571.1 hypothetical protein Regulator
  EHF40_RS04705 (EHF40_04705) mutX 867456..867932 (+) 477 WP_002984880.1 8-oxo-dGTP diphosphatase Machinery gene
  EHF40_RS04710 (EHF40_04710) - 867990..869171 (+) 1182 WP_002984879.1 AI-2E family transporter -
  EHF40_RS04715 (EHF40_04715) - 869161..870408 (+) 1248 WP_002984878.1 tetratricopeptide repeat protein -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7224.11 Da        Isoelectric Point: 4.0606

>NTDB_id=285818 EHF40_RS04700 WP_011528571.1 866860..867048(+) (prx) [Streptococcus pyogenes strain Duke-Large]
MLTYDEFKQAIDREYITGDTVMIVRKNGQIFDYVLPHEEVRNGEVVTIERISDVMAELSESE

Nucleotide


Download         Length: 189 bp        

>NTDB_id=285818 EHF40_RS04700 WP_011528571.1 866860..867048(+) (prx) [Streptococcus pyogenes strain Duke-Large]
ATGCTAACATATGACGAGTTTAAGCAAGCAATCGACCGTGAATATATCACAGGAGACACAGTTATGATCGTGCGCAAGAA
CGGACAGATTTTTGATTATGTGTTGCCGCATGAAGAAGTGAGAAATGGGGAAGTTGTGACAATCGAGCGGATATCAGATG
TTATGGCAGAACTTTCTGAGTCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

76.667

96.774

0.742
  prx Streptococcus pyogenes MGAS315

76.271

95.161

0.726
  prx Streptococcus pyogenes MGAS8232

76.271

95.161

0.726
  prx Streptococcus pyogenes MGAS315

71.667

96.774

0.694
  prx Streptococcus pyogenes MGAS315

90.698

69.355

0.629
  prx Streptococcus pyogenes MGAS315

85.366

66.129

0.565
  prx Streptococcus pyogenes MGAS315

76.19

67.742

0.516