Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   EGX82_RS02560 Genome accession   NZ_CP033822
Coordinates   521320..521499 (-) Length   59 a.a.
NCBI ID   WP_000965642.1    Uniprot ID   Q8E0V9
Organism   Streptococcus agalactiae strain FDAARGOS_512     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 516320..526499
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGX82_RS02520 (EGX82_02520) - 516618..517895 (-) 1278 WP_000594361.1 ABC transporter permease -
  EGX82_RS02525 (EGX82_02525) - 518638..518799 (+) 162 WP_000508795.1 NINE protein -
  EGX82_RS11290 - 518972..520334 (-) 1363 Protein_483 IS3 family transposase -
  EGX82_RS02550 (EGX82_02550) - 520355..520614 (+) 260 Protein_484 integrase -
  EGX82_RS11295 - 520650..521039 (+) 390 Protein_485 site-specific integrase -
  EGX82_RS02560 (EGX82_02560) prx 521320..521499 (-) 180 WP_000965642.1 hypothetical protein Regulator
  EGX82_RS11390 - 521655..521780 (+) 126 WP_017285425.1 hypothetical protein -
  EGX82_RS02565 (EGX82_02565) - 521916..522086 (+) 171 WP_000356856.1 hypothetical protein -
  EGX82_RS02570 (EGX82_02570) - 522127..522327 (-) 201 WP_000076712.1 CsbD family protein -
  EGX82_RS02575 (EGX82_02575) - 522437..522736 (-) 300 WP_000258211.1 STAS-like domain-containing protein -
  EGX82_RS02580 (EGX82_02580) - 522730..523626 (-) 897 WP_001061853.1 sensor histidine kinase -
  EGX82_RS02585 (EGX82_02585) - 523822..524541 (-) 720 WP_000236382.1 peptidoglycan amidohydrolase family protein -
  EGX82_RS02590 (EGX82_02590) - 524543..524878 (-) 336 WP_001001959.1 phage holin -
  EGX82_RS02595 (EGX82_02595) - 524880..525182 (-) 303 WP_000215499.1 hypothetical protein -
  EGX82_RS02600 (EGX82_02600) - 525195..525407 (-) 213 WP_000698337.1 hypothetical protein -
  EGX82_RS02605 (EGX82_02605) - 525382..525708 (-) 327 WP_000404431.1 DUF1366 domain-containing protein -

Sequence


Protein


Download         Length: 59 a.a.        Molecular weight: 6842.78 Da        Isoelectric Point: 4.3085

>NTDB_id=284882 EGX82_RS02560 WP_000965642.1 521320..521499(-) (prx) [Streptococcus agalactiae strain FDAARGOS_512]
MLYIDEFKEAIDKGYISGNTVAIVRKNGKIFDYVLPHEEVRDDEVVTVESVEEVLRELK

Nucleotide


Download         Length: 180 bp        

>NTDB_id=284882 EGX82_RS02560 WP_000965642.1 521320..521499(-) (prx) [Streptococcus agalactiae strain FDAARGOS_512]
ATGTTATATATAGATGAGTTTAAAGAAGCGATTGATAAAGGCTATATTTCAGGGAACACAGTAGCGATAGTGCGTAAAAA
CGGAAAGATATTTGATTATGTGTTGCCGCACGAGGAAGTGAGAGATGATGAAGTTGTGACAGTTGAGAGTGTAGAAGAGG
TGTTGAGGGAATTGAAGTGA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q8E0V9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

77.586

98.305

0.763

  prx Streptococcus pyogenes MGAS8232

74.138

98.305

0.729

  prx Streptococcus pyogenes MGAS315

68.966

98.305

0.678

  prx Streptococcus pyogenes MGAS315

93.023

72.881

0.678

  prx Streptococcus pyogenes MGAS315

67.241

98.305

0.661

  prx Streptococcus pyogenes MGAS315

78.049

69.492

0.542

  prx Streptococcus pyogenes MGAS315

76.19

71.186

0.542


Multiple sequence alignment