Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   EGX80_RS01975 Genome accession   NZ_CP033815
Coordinates   351819..352001 (-) Length   60 a.a.
NCBI ID   WP_011054793.1    Uniprot ID   A0A0H2UWN8
Organism   Streptococcus pyogenes strain FDAARGOS_514     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 346819..357001
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGX80_RS01965 (EGX80_01965) rocA 348256..349610 (-) 1355 Protein_389 transcriptional regulator RocA -
  EGX80_RS01970 (EGX80_01970) rlmD 350275..351630 (-) 1356 WP_002991789.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  EGX80_RS10320 - 351614..351739 (-) 126 WP_272916705.1 hypothetical protein -
  EGX80_RS01975 (EGX80_01975) prx 351819..352001 (-) 183 WP_011054793.1 hypothetical protein Regulator
  EGX80_RS01980 (EGX80_01980) speA 352221..352976 (+) 756 WP_011054794.1 streptococcal pyrogenic exotoxin SpeA -
  EGX80_RS01985 (EGX80_01985) - 353098..353757 (-) 660 WP_009880240.1 hypothetical protein -
  EGX80_RS01990 (EGX80_01990) - 353757..353978 (-) 222 WP_009880241.1 hypothetical protein -
  EGX80_RS01995 (EGX80_01995) - 353988..354761 (-) 774 WP_011054795.1 hypothetical protein -
  EGX80_RS02000 (EGX80_02000) - 354772..355374 (-) 603 WP_011054796.1 hypothetical protein -
  EGX80_RS02005 (EGX80_02005) - 355386..356150 (-) 765 WP_011054797.1 CHAP domain-containing protein -
  EGX80_RS02010 (EGX80_02010) - 356152..356484 (-) 333 WP_011054798.1 phage holin -
  EGX80_RS10325 - 356820..356942 (-) 123 WP_015055953.1 hypothetical protein -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 7014.08 Da        Isoelectric Point: 4.3313

>NTDB_id=284776 EGX80_RS01975 WP_011054793.1 351819..352001(-) (prx) [Streptococcus pyogenes strain FDAARGOS_514]
MLYIDEFKEAIDKGYILGDTVAIVRKNGKIFDYVLPHEKVRDDEVVTVERVEEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=284776 EGX80_RS01975 WP_011054793.1 351819..352001(-) (prx) [Streptococcus pyogenes strain FDAARGOS_514]
ATGTTATATATAGATGAGTTTAAAGAAGCGATTGATAAGGGGTATATTTTAGGTGACACAGTAGCGATAGTGCGTAAAAA
CGGAAAGATATTTGATTATGTGTTACCACACGAAAAAGTGAGAGATGATGAAGTTGTGACGGTAGAGAGAGTGGAAGAAG
TGATGGTGGAATTAGACAAATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  PDB 6CKA
  PDB 7N10
  PDB 7N1N
  PDB 8VSR

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

100

100

1

  prx Streptococcus pyogenes MGAS315

78.333

100

0.783

  prx Streptococcus pyogenes MGAS315

76.667

100

0.767

  prx Streptococcus pyogenes MGAS315

75

100

0.75

  prx Streptococcus pyogenes MGAS8232

75

100

0.75

  prx Streptococcus pyogenes MGAS315

68.333

100

0.683

  prx Streptococcus pyogenes MGAS315

76.19

70

0.533


Multiple sequence alignment