Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   EGX80_RS00085 Genome accession   NZ_CP033815
Coordinates   16075..16257 (-) Length   60 a.a.
NCBI ID   WP_029714017.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain FDAARGOS_514     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 11075..21257
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGX80_RS00060 (EGX80_00060) msrB 11847..12284 (-) 438 WP_011054453.1 peptide-methionine (R)-S-oxide reductase MsrB -
  EGX80_RS00065 (EGX80_00065) slc2 12437..13303 (-) 867 WP_149031607.1 LPXTG-anchored collagen-like adhesin Scl2/SclB -
  EGX80_RS00070 (EGX80_00070) lepA 13490..15322 (-) 1833 WP_011054451.1 translation elongation factor 4 -
  EGX80_RS09975 - 15446..15852 (-) 407 Protein_14 nucleoside-diphosphate kinase -
  EGX80_RS00085 (EGX80_00085) prx 16075..16257 (-) 183 WP_029714017.1 hypothetical protein Regulator
  EGX80_RS00090 (EGX80_00090) - 16456..16665 (-) 210 WP_011054450.1 helix-turn-helix transcriptional regulator -
  EGX80_RS09980 - 16819..16965 (+) 147 WP_011054449.1 hypothetical protein -
  EGX80_RS00095 (EGX80_00095) - 17106..17357 (+) 252 WP_011054448.1 hypothetical protein -
  EGX80_RS00100 (EGX80_00100) - 17621..17860 (+) 240 WP_011054447.1 hypothetical protein -
  EGX80_RS00105 (EGX80_00105) - 17918..18274 (+) 357 WP_011054446.1 hypothetical protein -
  EGX80_RS00110 (EGX80_00110) - 18390..19598 (-) 1209 WP_011054445.1 glucosaminidase domain-containing protein -
  EGX80_RS00115 (EGX80_00115) - 19714..19941 (-) 228 WP_011054444.1 phage holin -
  EGX80_RS00120 (EGX80_00120) - 19938..20213 (-) 276 WP_002987582.1 hypothetical protein -
  EGX80_RS00125 (EGX80_00125) - 20223..20840 (-) 618 WP_010922094.1 DUF1366 domain-containing protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6890.90 Da        Isoelectric Point: 4.1947

>NTDB_id=284759 EGX80_RS00085 WP_029714017.1 16075..16257(-) (prx) [Streptococcus pyogenes strain FDAARGOS_514]
MLTYDEFKQAIDNGYITADTVAIVRKNGLIFDYVLPHESVRSCEIVIEERVAEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=284759 EGX80_RS00085 WP_029714017.1 16075..16257(-) (prx) [Streptococcus pyogenes strain FDAARGOS_514]
ATGCTAACATACGACGAGTTTAAGCAAGCGATTGACAATGGATATATCACAGCAGACACAGTAGCGATCGTGCGTAAAAA
CGGATTGATATTTGATTATGTGTTGCCGCACGAGTCTGTGAGATCGTGTGAGATTGTGATCGAGGAGAGGGTGGCGGAGG
TGATGGTGGAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

100

100

1
  prx Streptococcus pyogenes MGAS315

80

100

0.8
  prx Streptococcus pyogenes MGAS315

75

100

0.75
  prx Streptococcus pyogenes MGAS315

73.333

100

0.733
  prx Streptococcus pyogenes MGAS8232

73.333

100

0.733
  prx Streptococcus pyogenes MGAS315

80.952

70

0.567
  prx Streptococcus pyogenes MGAS315

78.571

70

0.55