Detailed information NTG0282359

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: C7M16_RS16035
• Genome accession: NZ_CP028201
• Coordinates: 3172675..3173268 (+)
• Length: 197 a.a.
• NCBI ID: WP_003228214.1
• Uniprot ID: A0A199WEF2
• Organism: Bacillus subtilis strain SRCM102753
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3167675..3178268

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7M16_RS16005 (C7M16_03157)	psmA	3167930..3168265 (+)	336	WP_014480966.1	SMR family transporter	-
C7M16_RS16010 (C7M16_03158)	psmB	3168265..3168585 (+)	321	WP_003228222.1	QacE family quaternary ammonium compound efflux SMR transporter	-
C7M16_RS16015 (C7M16_03159)	yvdQ	3168621..3169133 (-)	513	WP_080529823.1	DUF3231 family protein	-
C7M16_RS16020 (C7M16_03160)	cotNP	3169385..3170728 (-)	1344	WP_160221832.1	FAD-binding oxidoreductase	-
C7M16_RS16025 (C7M16_03161)	cotR	3171085..3172047 (+)	963	WP_160221833.1	sporulation hydrolase CotR	-
C7M16_RS16035 (C7M16_03163)	clpP	3172675..3173268 (+)	594	WP_003228214.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
C7M16_RS16040 (C7M16_03164)	pgmB	3173331..3174005 (-)	675	WP_046663977.1	beta-phosphoglucomutase	-
C7M16_RS16045 (C7M16_03165)	malL	3174002..3175687 (-)	1686	WP_032722569.1	oligo-1,6-glucosidase	-
C7M16_RS16050 (C7M16_03166)	mdxK	3175680..3177953 (-)	2274	WP_160221989.1	maltose phosphorylase	-

Sequence

Protein

• Length: 197 a.a.
• Molecular weight: 21682.00 Da
• Isoelectric Point: 4.9416

>NTDB_id=282359 C7M16_RS16035 WP_003228214.1 3172675..3173268(+) (clpP) [Bacillus subtilis strain SRCM102753]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEALEYGLIDKILTHTEDKK

Nucleotide

• Length: 594 bp

>NTDB_id=282359 C7M16_RS16035 WP_003228214.1 3172675..3173268(+) (clpP) [Bacillus subtilis strain SRCM102753]
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGCGTATGACATTTATTCTCGTCTATTAAAGGA
TCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCTTAGCAGCAG
AAGACCCTGAAAAAGAAATTTCTCTTTACATCAACAGCCCGGGCGGCTCTATTACAGCCGGTATGGCGATCTATGATACC
ATGCAGTTTATTAAGCCGAAGGTATCTACAATTTGTATCGGTATGGCTGCGTCAATGGGCGCGTTCCTGCTTGCAGCCGG
CGAAAAAGGCAAACGCTATGCGCTTCCAAACAGTGAAGTCATGATTCACCAGCCTCTTGGCGGTGCGCAAGGTCAGGCGA
CAGAAATTGAAATTGCCGCGAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTCCTTGCTGAACGTACTGGCCAG
CCGCTTGAAGTGATCGAACGCGACACAGACCGTGATAACTTCAAGTCTGCTGAAGAAGCGCTTGAATACGGCCTGATTGA
CAAAATTTTGACTCACACAGAAGACAAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

3D structure

• AlphaFold DB: A0A199WEF2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	100	100	1
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	68.617	95.431	0.655
clpP	Streptococcus thermophilus LMG 18311	58.163	99.492	0.579
clpP	Streptococcus thermophilus LMD-9	58.163	99.492	0.579
clpP	Streptococcus pneumoniae D39	57.812	97.462	0.563
clpP	Streptococcus pneumoniae Rx1	57.812	97.462	0.563
clpP	Streptococcus pneumoniae R6	57.812	97.462	0.563
clpP	Streptococcus pneumoniae TIGR4	57.812	97.462	0.563
clpP	Lactococcus lactis subsp. cremoris KW2	57.895	96.447	0.558
clpP	Streptococcus pyogenes JRS4	56.122	99.492	0.558
clpP	Streptococcus pyogenes MGAS315	56.122	99.492	0.558
clpP	Streptococcus mutans UA159	54.822	100	0.548
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	55.789	96.447	0.538