Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   C9I27_RS01515 Genome accession   NZ_CP028148
Coordinates   276804..277355 (+) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TJ11-001     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 271804..282355
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C9I27_RS01515 comX/sigX/comX2/sigX2 276804..277355 (+) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator
  C9I27_RS01520 - 277914..278441 (+) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  C9I27_RS01525 yqeH 278441..279559 (+) 1119 WP_002991096.1 ribosome biogenesis GTPase YqeH -
  C9I27_RS01530 yhbY 279584..279892 (+) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  C9I27_RS01535 - 279961..280593 (+) 633 WP_002991091.1 nicotinate-nucleotide adenylyltransferase -
  C9I27_RS01540 yqeK 280590..281183 (+) 594 WP_002985989.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  C9I27_RS01545 rsfS 281207..281560 (+) 354 WP_002991088.1 ribosome silencing factor -
  C9I27_RS01550 - 281608..282351 (+) 744 WP_002991085.1 class I SAM-dependent methyltransferase -

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=281681 C9I27_RS01515 WP_010921894.1 276804..277355(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain TJ11-001]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=281681 C9I27_RS01515 WP_010921894.1 276804..277355(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain TJ11-001]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.