Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | C7N77_RS00090 | Genome accession | NZ_CP027856 |
| Coordinates | 17467..17787 (+) | Length | 106 a.a. |
| NCBI ID | WP_106884857.1 | Uniprot ID | - |
| Organism | Aeromonas rivipollensis strain KN-Mc-11N1 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 12467..22787
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7N77_RS00065 (C7N77_00065) | trhA | 13041..13676 (-) | 636 | WP_042649093.1 | PAQR family membrane homeostasis protein TrhA | - |
| C7N77_RS00070 (C7N77_00070) | - | 13910..15442 (+) | 1533 | WP_106884854.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| C7N77_RS00075 (C7N77_00075) | - | 15579..16130 (+) | 552 | WP_106884855.1 | septation protein A | - |
| C7N77_RS00080 (C7N77_00080) | - | 16155..16451 (+) | 297 | WP_025325883.1 | YciI family protein | - |
| C7N77_RS00085 (C7N77_00085) | cysQ | 16541..17296 (-) | 756 | WP_106884856.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| C7N77_RS00090 (C7N77_00090) | comEA | 17467..17787 (+) | 321 | WP_106884857.1 | ComEA family DNA-binding protein | Machinery gene |
| C7N77_RS00095 (C7N77_00095) | galU | 17881..18792 (+) | 912 | WP_106884858.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| C7N77_RS00100 (C7N77_00100) | - | 19006..20403 (+) | 1398 | WP_106884859.1 | peptide MFS transporter | - |
| C7N77_RS00105 (C7N77_00105) | - | 20474..21445 (-) | 972 | WP_106884860.1 | response regulator | - |
| C7N77_RS00110 (C7N77_00110) | - | 21758..22432 (+) | 675 | WP_106887773.1 | DnaT-like ssDNA-binding domain-containing protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11142.92 Da Isoelectric Point: 7.9651
>NTDB_id=280964 C7N77_RS00090 WP_106884857.1 17467..17787(+) (comEA) [Aeromonas rivipollensis strain KN-Mc-11N1]
MSYKTLTAALLLGCLPLLSQPVLAADKPATKPATTVTSTKEVGKINLNTASADELAALKGVGEKKAQAIVDYREKQGKFT
SVDQLEEVSGIGPATLDANRDMIIVK
MSYKTLTAALLLGCLPLLSQPVLAADKPATKPATTVTSTKEVGKINLNTASADELAALKGVGEKKAQAIVDYREKQGKFT
SVDQLEEVSGIGPATLDANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=280964 C7N77_RS00090 WP_106884857.1 17467..17787(+) (comEA) [Aeromonas rivipollensis strain KN-Mc-11N1]
ATGAGCTACAAAACGCTGACCGCTGCCCTGCTGCTGGGCTGCCTGCCCCTGCTGAGCCAACCTGTGCTCGCCGCCGACAA
GCCGGCTACCAAACCGGCCACAACTGTCACCAGTACCAAGGAGGTGGGCAAGATCAACCTCAATACCGCCAGTGCCGATG
AACTCGCGGCGTTGAAGGGCGTTGGCGAGAAGAAGGCGCAAGCCATCGTCGATTACCGCGAGAAGCAGGGCAAGTTCACC
TCGGTGGATCAGTTGGAAGAGGTTAGCGGCATAGGGCCCGCCACCCTGGATGCGAACCGGGACATGATTATCGTCAAGTA
A
ATGAGCTACAAAACGCTGACCGCTGCCCTGCTGCTGGGCTGCCTGCCCCTGCTGAGCCAACCTGTGCTCGCCGCCGACAA
GCCGGCTACCAAACCGGCCACAACTGTCACCAGTACCAAGGAGGTGGGCAAGATCAACCTCAATACCGCCAGTGCCGATG
AACTCGCGGCGTTGAAGGGCGTTGGCGAGAAGAAGGCGCAAGCCATCGTCGATTACCGCGAGAAGCAGGGCAAGTTCACC
TCGGTGGATCAGTTGGAAGAGGTTAGCGGCATAGGGCCCGCCACCCTGGATGCGAACCGGGACATGATTATCGTCAAGTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
50.467 |
100 |
0.509 |
| comEA | Vibrio cholerae strain A1552 |
50.467 |
100 |
0.509 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
47.706 |
100 |
0.491 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
44.144 |
100 |
0.462 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
44.898 |
92.453 |
0.415 |
| comEA | Legionella pneumophila str. Paris |
39.216 |
96.226 |
0.377 |
| comEA | Legionella pneumophila strain ERS1305867 |
39.216 |
96.226 |
0.377 |
| comEA | Acinetobacter baylyi ADP1 |
49.367 |
74.528 |
0.368 |