Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   SPYM_RS03630 Genome accession   NC_009332
Coordinates   690051..690233 (+) Length   60 a.a.
NCBI ID   WP_011888783.1    Uniprot ID   -
Organism   Streptococcus pyogenes str. Manfredo     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 685051..695233
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPYM_RS03595 (SpyM50684) - 685509..685808 (+) 300 WP_002988799.1 hypothetical protein -
  SPYM_RS03600 (SpyM50685) - 685805..685990 (+) 186 WP_011888776.1 holin -
  SPYM_RS03610 (SpyM50687) - 686104..687327 (+) 1224 WP_011888778.1 peptidoglycan amidohydrolase family protein -
  SPYM_RS03615 (SpyM50689) - 687614..688585 (+) 972 WP_011888780.1 Abi family protein -
  SPYM_RS03620 (SpyM50690) - 688769..688969 (+) 201 WP_011888781.1 CsbD family protein -
  SPYM_RS03625 (SpyM50691) - 689191..689985 (+) 795 WP_011888782.1 DNA/RNA non-specific endonuclease -
  SPYM_RS03630 (SpyM50692) prx 690051..690233 (+) 183 WP_011888783.1 hypothetical protein Regulator
  SPYM_RS03635 (SpyM50693) - 690765..692627 (+) 1863 WP_011888784.1 heavy metal translocating P-type ATPase -
  SPYM_RS09815 (SpyM50694) - 692699..692872 (+) 174 WP_011017962.1 hypothetical protein -
  SPYM_RS03640 (SpyM50695) - 692927..693862 (-) 936 WP_011888785.1 dihydroorotate oxidase -
  SPYM_RS03645 (SpyM50696) - 694101..694796 (+) 696 WP_002983928.1 phosphoglycerate mutase -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6917.86 Da        Isoelectric Point: 4.3455

>NTDB_id=27859 SPYM_RS03630 WP_011888783.1 690051..690233(+) (prx) [Streptococcus pyogenes str. Manfredo]
MLTYDEFKQAIDNGYITGDTVMIVRKNGQIFDYVLPHEKVKNGEVVTDEKVEEVLVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=27859 SPYM_RS03630 WP_011888783.1 690051..690233(+) (prx) [Streptococcus pyogenes str. Manfredo]
ATGTTAACATACGATGAATTTAAGCAAGCGATTGACAATGGATATATCACAGGAGACACAGTTATGATCGTGCGTAAAAA
CGGACAGATTTTTGATTATGTTTTGCCACATGAGAAAGTAAAGAATGGAGAAGTTGTGACAGACGAAAAAGTGGAAGAGG
TGCTGGTGGAGCTTTCGAGATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS8232

93.333

100

0.933
  prx Streptococcus pyogenes MGAS315

91.667

100

0.917
  prx Streptococcus pyogenes MGAS315

81.667

100

0.817
  prx Streptococcus pyogenes MGAS315

75

100

0.75
  prx Streptococcus pyogenes MGAS315

88.372

71.667

0.633
  prx Streptococcus pyogenes MGAS315

90.244

68.333

0.617
  prx Streptococcus pyogenes MGAS315

78.571

70

0.55

Multiple sequence alignment