Detailed information NTG0276789

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: PA34_RS31220
• Genome accession: NZ_CP032552
• Coordinates: 6497469..6498962 (+)
• Length: 497 a.a.
• NCBI ID: WP_009878288.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain PA34
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 6492469..6503962

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PA34_RS31185 (PA34_031185)	-	6492590..6493504 (-)	915	WP_023100055.1	fimbrial protein	-
PA34_RS31195 (PA34_031195)	sutA	6493941..6494258 (-)	318	WP_003096440.1	transcriptional regulator SutA	-
PA34_RS31200 (PA34_031200)	-	6494336..6494761 (-)	426	WP_003096441.1	secondary thiamine-phosphate synthase enzyme YjbQ	-
PA34_RS31205 (PA34_031205)	-	6495022..6496350 (-)	1329	WP_031805648.1	ammonium transporter	-
PA34_RS31210 (PA34_031210)	glnK	6496390..6496728 (-)	339	WP_003096476.1	P-II family nitrogen regulator	-
PA34_RS31215 (PA34_031215)	-	6497168..6497428 (+)	261	WP_003096478.1	accessory factor UbiK family protein	-
PA34_RS31220 (PA34_031220)	comM	6497469..6498962 (+)	1494	WP_009878288.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
PA34_RS31225 (PA34_031225)	betT	6499087..6501072 (+)	1986	WP_003096496.1	choline BCCT transporter BetT	-
PA34_RS31230 (PA34_031230)	pchP	6501115..6502164 (-)	1050	WP_033976450.1	phosphorylcholine phosphatase	-
PA34_RS31235 (PA34_031235)	-	6502315..6503232 (-)	918	WP_004352313.1	LysR substrate-binding domain-containing protein	-

Sequence

Protein

• Length: 497 a.a.
• Molecular weight: 53066.98 Da
• Isoelectric Point: 7.9587

>NTDB_id=276789 PA34_RS31220 WP_009878288.1 6497469..6498962(+) (comM) [Pseudomonas aeruginosa strain PA34]
MSLAIVHSRAQVGVEAPCVSVEAHLANGLPSLTLVGLPETAVRESKDRVRSALLNAGFDFPARRITLNLAPADLPKDGGR
FDLAIALGILAASGQLPGTALDGLECLGELALSGAIRPVRGVLPAALAARDARRVLVVPKENAEEASLASGLTVFAVDHL
LEIAGHLSGQAPLPPYQARGLLRAPFPYPDLAEVQGQAAAKRALLVAAAGAHNLLLSGPPGTGKTLLASRLPGLLPALDE
DEALEVAAIHSVASHVPLRHWPQRPFRQPHHSASAPALVGGGSRPQPGEITLAHQGVLFLDELPEFERKVLEVLREPLES
GEIVIARANGRVRFPARFQLVAAMNPCPCGYLGDPSGRCRCTPEQVQRYRGKLSGPLLDRIDLHVSVLRESTSLQPGHGE
TATAEISERVGAARQRQLARQGCANAHLDLQAMHRNCALAEADRRWLEAAGERLELSLRALHRILKVARTLADLERIDAI
ERRHLAEALQYRATTST

Nucleotide

• Length: 1494 bp

>NTDB_id=276789 PA34_RS31220 WP_009878288.1 6497469..6498962(+) (comM) [Pseudomonas aeruginosa strain PA34]
ATGTCCCTGGCGATTGTCCACAGCCGAGCCCAGGTCGGCGTCGAAGCCCCCTGCGTCAGCGTCGAGGCGCACCTGGCCAA
CGGCCTGCCTTCGCTGACCCTGGTCGGCCTGCCGGAAACCGCGGTGCGCGAGAGCAAGGACCGCGTGCGCAGCGCCCTGC
TCAATGCCGGTTTCGACTTCCCCGCGCGGCGCATCACCCTCAACCTCGCCCCCGCCGACCTGCCCAAGGACGGCGGTCGC
TTCGACCTGGCCATCGCACTCGGCATCCTCGCCGCCAGCGGCCAGTTGCCCGGCACCGCCCTCGACGGCCTGGAGTGCCT
CGGCGAACTGGCCCTGTCCGGGGCGATCCGGCCAGTGCGAGGCGTATTGCCGGCCGCGCTGGCGGCGCGCGACGCAAGGC
GCGTTCTGGTGGTACCGAAGGAAAATGCCGAAGAGGCCAGCCTGGCCAGCGGGCTGACGGTGTTCGCCGTGGACCACCTG
CTGGAGATCGCCGGACACCTCTCCGGCCAGGCCCCGCTGCCGCCCTACCAGGCCCGCGGCCTGCTCCGCGCGCCCTTCCC
TTATCCAGACCTGGCCGAGGTCCAGGGCCAGGCCGCCGCCAAGCGCGCCCTGCTGGTGGCCGCCGCCGGCGCGCACAACC
TGTTGCTCAGCGGCCCGCCGGGCACCGGCAAGACCCTCCTGGCCAGCCGCCTGCCCGGCCTGCTGCCGGCGCTCGACGAG
GACGAGGCCCTGGAGGTCGCAGCGATCCATTCGGTGGCCAGCCACGTCCCCCTCAGGCACTGGCCGCAGCGACCGTTCCG
CCAGCCGCACCACTCCGCCTCCGCGCCGGCCCTGGTCGGCGGCGGCAGCCGCCCGCAGCCGGGCGAGATCACCCTGGCGC
ACCAGGGCGTGCTGTTCCTCGACGAACTGCCGGAGTTCGAGCGCAAGGTCCTGGAGGTCCTGCGCGAGCCGCTGGAAAGC
GGCGAGATCGTCATTGCCCGGGCCAACGGCCGGGTACGTTTCCCGGCGCGCTTCCAACTGGTGGCGGCGATGAATCCCTG
TCCCTGTGGCTACCTCGGCGATCCCAGCGGCCGCTGCCGCTGCACCCCGGAACAGGTCCAGCGCTACCGGGGCAAGCTGT
CCGGACCGCTGCTCGATCGCATCGACCTGCACGTCAGCGTGCTCCGCGAAAGCACCAGCCTGCAGCCAGGACACGGCGAA
ACCGCTACCGCCGAGATCAGCGAACGGGTTGGCGCCGCACGGCAACGGCAACTGGCCCGCCAGGGCTGCGCCAATGCCCA
TCTCGACCTCCAGGCGATGCACCGCAATTGTGCACTCGCCGAAGCGGACCGCCGCTGGCTGGAGGCTGCCGGAGAGCGCC
TGGAACTTTCCTTGCGCGCCTTGCATCGCATACTCAAGGTGGCCCGGACGCTGGCCGACCTGGAGCGCATCGATGCCATC
GAACGCCGGCACCTGGCGGAAGCCCTGCAGTATCGGGCAACGACCTCCACGTGA

Domains

Predicted by InterProScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-390)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (402-492)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio campbellii strain DS40M4	56.452	99.799	0.563
comM	Haemophilus influenzae Rd KW20	55.01	100	0.563
comM	Vibrio cholerae O1 biovar El Tor strain E7946	56.048	99.799	0.559
comM	Vibrio cholerae strain A1552	56.048	99.799	0.559
comM	Glaesserella parasuis strain SC1401	55.09	100	0.555
comM	Acinetobacter baylyi ADP1	53.414	100	0.535
comM	Legionella pneumophila str. Paris	50.301	100	0.505
comM	Legionella pneumophila strain ERS1305867	50.301	100	0.505
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	46.154	100	0.471
comM	Helicobacter pylori 26695	38.845	100	0.392