Detailed information
Bioinformatically predicted
Overview
| Name | comP | Type | Machinery gene |
| Locus tag | C6N19_RS02755 | Genome accession | NZ_CP027250 |
| Coordinates | 341131..341577 (+) | Length | 148 a.a. |
| NCBI ID | WP_106405811.1 | Uniprot ID | - |
| Organism | Acinetobacter pittii strain WCHAP100004 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 336131..346577
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6N19_RS02735 (C6N19_02755) | - | 337517..338404 (+) | 888 | WP_002117027.1 | metal-dependent hydrolase | - |
| C6N19_RS02740 (C6N19_02760) | - | 338534..339124 (+) | 591 | WP_002117090.1 | LemA family protein | - |
| C6N19_RS02745 (C6N19_02765) | - | 339149..340228 (+) | 1080 | WP_002116710.1 | TPM domain-containing protein | - |
| C6N19_RS02750 (C6N19_02770) | - | 340222..340782 (+) | 561 | WP_002116794.1 | TPM domain-containing protein | - |
| C6N19_RS02755 (C6N19_02775) | comP | 341131..341577 (+) | 447 | WP_106405811.1 | pilin | Machinery gene |
| C6N19_RS02760 (C6N19_02780) | - | 341635..342747 (+) | 1113 | Protein_310 | O-antigen ligase family protein | - |
| C6N19_RS02765 (C6N19_02785) | - | 342822..344030 (+) | 1209 | WP_000343018.1 | IS256-like element ISAba26 family transposase | - |
| C6N19_RS02770 (C6N19_02790) | - | 344065..344274 (+) | 210 | Protein_312 | O-antigen ligase domain-containing protein | - |
| C6N19_RS02775 (C6N19_02795) | - | 344380..346008 (+) | 1629 | WP_106405812.1 | PglL family O-oligosaccharyltransferase | - |
| C6N19_RS02780 (C6N19_02800) | bfr | 346051..346515 (-) | 465 | WP_002117082.1 | heteropolymeric bacterioferritin subunit Bfr | - |
Sequence
Protein
Download Length: 148 a.a. Molecular weight: 15212.41 Da Isoelectric Point: 4.6894
>NTDB_id=276021 C6N19_RS02755 WP_106405811.1 341131..341577(+) (comP) [Acinetobacter pittii strain WCHAP100004]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQDYMVRSKVTEGLNLASSYKTTIAENAGNGAANLAVGVPNFAATENVASI
TPDGTTGKIEILYTDKAKGLTLTLTPYDGAEGGIAIAAGTVPTNQITWVCTVDSAANAKYVPSNCRGS
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQDYMVRSKVTEGLNLASSYKTTIAENAGNGAANLAVGVPNFAATENVASI
TPDGTTGKIEILYTDKAKGLTLTLTPYDGAEGGIAIAAGTVPTNQITWVCTVDSAANAKYVPSNCRGS
Nucleotide
Download Length: 447 bp
>NTDB_id=276021 C6N19_RS02755 WP_106405811.1 341131..341577(+) (comP) [Acinetobacter pittii strain WCHAP100004]
ATGAATGCACAAAAAGGTTTTACTTTAATTGAACTCATGATCGTGGTTGCCATTATTGGTATTTTGGCAGCAATCGCGAT
TCCAGCTTATCAAGATTATATGGTTCGTTCAAAAGTAACAGAAGGTTTGAATTTAGCTTCATCTTATAAGACTACAATTG
CTGAAAATGCTGGAAATGGTGCTGCGAATTTAGCAGTAGGAGTTCCTAACTTTGCTGCAACAGAAAATGTAGCATCGATC
ACGCCAGATGGGACTACAGGAAAAATTGAAATTCTATATACAGATAAAGCAAAAGGTTTAACGTTAACTTTAACTCCATA
TGACGGCGCTGAAGGTGGTATAGCGATTGCTGCTGGGACTGTACCAACAAACCAAATTACTTGGGTATGTACTGTAGATT
CAGCTGCTAATGCTAAATATGTACCATCAAATTGCCGTGGTTCTTAA
ATGAATGCACAAAAAGGTTTTACTTTAATTGAACTCATGATCGTGGTTGCCATTATTGGTATTTTGGCAGCAATCGCGAT
TCCAGCTTATCAAGATTATATGGTTCGTTCAAAAGTAACAGAAGGTTTGAATTTAGCTTCATCTTATAAGACTACAATTG
CTGAAAATGCTGGAAATGGTGCTGCGAATTTAGCAGTAGGAGTTCCTAACTTTGCTGCAACAGAAAATGTAGCATCGATC
ACGCCAGATGGGACTACAGGAAAAATTGAAATTCTATATACAGATAAAGCAAAAGGTTTAACGTTAACTTTAACTCCATA
TGACGGCGCTGAAGGTGGTATAGCGATTGCTGCTGGGACTGTACCAACAAACCAAATTACTTGGGTATGTACTGTAGATT
CAGCTGCTAATGCTAAATATGTACCATCAAATTGCCGTGGTTCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comP | Acinetobacter baylyi ADP1 |
50.307 |
100 |
0.554 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
48.125 |
100 |
0.52 |
| pilA2 | Legionella pneumophila str. Paris |
51.701 |
99.324 |
0.514 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
51.02 |
99.324 |
0.507 |
| pilA/pilA1 | Eikenella corrodens VA1 |
41.358 |
100 |
0.453 |
| pilA | Acinetobacter baumannii strain A118 |
42.667 |
100 |
0.432 |
| pilA | Pseudomonas aeruginosa PAK |
36.527 |
100 |
0.412 |