Detailed information    

insolico Bioinformatically predicted

Overview

Name   comE/blpR   Type   Regulator
Locus tag   C5Q96_RS01330 Genome accession   NZ_CP027228
Coordinates   287544..288278 (+) Length   244 a.a.
NCBI ID   WP_106056499.1    Uniprot ID   A0A2S0L2R0
Organism   Mogibacterium diversum strain CCUG 47132     
Function   activate transcription of early competence genes; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 282544..293278
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C5Q96_RS01315 (C5Q96_01315) - 282807..283490 (+) 684 WP_106056493.1 transcriptional regulator -
  C5Q96_RS01320 (C5Q96_01320) - 283795..285465 (+) 1671 WP_106056495.1 formate--tetrahydrofolate ligase -
  C5Q96_RS01325 (C5Q96_01325) - 285594..287384 (+) 1791 WP_106056497.1 aminopeptidase P family N-terminal domain-containing protein -
  C5Q96_RS01330 (C5Q96_01330) comE/blpR 287544..288278 (+) 735 WP_106056499.1 response regulator transcription factor Regulator
  C5Q96_RS01335 (C5Q96_01335) - 288301..289602 (+) 1302 WP_158696649.1 sensor histidine kinase -
  C5Q96_RS01340 (C5Q96_01340) - 289819..290490 (+) 672 WP_106056501.1 ABC transporter ATP-binding protein -
  C5Q96_RS01345 (C5Q96_01345) - 290495..291208 (+) 714 WP_106056503.1 ABC transporter -
  C5Q96_RS01350 (C5Q96_01350) - 291434..292993 (-) 1560 WP_106056505.1 hypothetical protein -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 28309.62 Da        Isoelectric Point: 5.0906

>NTDB_id=275887 C5Q96_RS01330 WP_106056499.1 287544..288278(+) (comE/blpR) [Mogibacterium diversum strain CCUG 47132]
MINIFILEDEILQQSRIDNIIREVIDQKDLKCKTPEIFSSPKQMLDNISEFGSHQLFFLDIEIKGEEQKGLDIAKEIRSR
DPNATIVFVTTHTEFMPVTFKYKVAALDFIDKALDEELFKERVCSAIEYTICKVGSNIAQDSFAIETSMARVQVPFNNIL
YFETSPMIHKVILHTKDERMEFYGSIADVEKADSRLYRCHRSFVVNPDNIIKIDKESKIALFENGESCLISRMKYRGLLE
KLNY

Nucleotide


Download         Length: 735 bp        

>NTDB_id=275887 C5Q96_RS01330 WP_106056499.1 287544..288278(+) (comE/blpR) [Mogibacterium diversum strain CCUG 47132]
ATGATTAATATATTCATTTTAGAAGATGAGATACTGCAGCAATCACGAATCGACAATATAATCAGGGAAGTGATTGACCA
GAAAGATTTGAAGTGCAAAACTCCAGAAATTTTTAGCAGTCCGAAGCAGATGCTAGATAATATCTCAGAATTCGGTTCCC
ATCAACTGTTTTTCCTTGATATCGAGATTAAGGGAGAAGAACAGAAGGGACTGGATATTGCTAAGGAAATTCGTAGCCGA
GATCCTAATGCGACAATCGTATTTGTAACAACGCATACAGAGTTTATGCCTGTTACGTTTAAATATAAAGTAGCTGCGCT
AGATTTTATCGATAAAGCACTTGATGAAGAGTTATTCAAAGAGCGAGTGTGCTCGGCTATCGAGTACACTATCTGCAAGG
TTGGATCAAACATAGCTCAAGATTCGTTCGCTATTGAAACATCCATGGCACGTGTACAGGTACCGTTTAATAATATATTG
TATTTCGAGACTTCTCCGATGATCCACAAAGTAATTTTGCATACTAAAGATGAACGTATGGAGTTTTATGGTAGCATCGC
TGATGTTGAGAAGGCTGATAGTCGCCTCTACCGCTGTCACCGATCATTTGTAGTTAATCCTGATAATATAATTAAGATAG
ATAAGGAGAGCAAGATTGCTCTGTTTGAAAATGGAGAGAGCTGTCTGATATCAAGGATGAAGTACAGAGGTCTTCTTGAA
AAACTCAATTATTAG

Domains

Predicted by InterproScan.

LytTr DNA-binding domain (LytTR)

(152-242)

Response regulator receiver domain (Response_reg)

(4-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2S0L2R0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comE/blpR Streptococcus mutans UA159

52.301

97.951

0.512
  comE/comE1 Streptococcus equinus JB1

46.748

100

0.471
  comE/comE2 Streptococcus gordonii strain NCTC7865

39.286

100

0.406
  comE/comE1 Streptococcus gordonii str. Challis substr. CH1

39.286

100

0.406
  comE/comE2 Streptococcus equinus JB1

38.017

99.18

0.377
  comE Streptococcus mitis SK321

37.037

99.59

0.369
  comE Streptococcus mitis NCTC 12261

37.037

99.59

0.369

Multiple sequence alignment