Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | CSB68_RS19330 | Genome accession | NZ_CP027183 |
| Coordinates | 3957786..3958247 (+) | Length | 153 a.a. |
| NCBI ID | WP_000993718.1 | Uniprot ID | A0A9P2XM63 |
| Organism | Acinetobacter baumannii strain AR_0052 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3952786..3963247
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSB68_RS19310 (CSB68_3876) | - | 3954176..3955063 (+) | 888 | WP_001017330.1 | metal-dependent hydrolase | - |
| CSB68_RS19315 (CSB68_3877) | - | 3955194..3955784 (+) | 591 | WP_000846931.1 | LemA family protein | - |
| CSB68_RS19320 (CSB68_3878) | - | 3955806..3956888 (+) | 1083 | WP_001246381.1 | TPM domain-containing protein | - |
| CSB68_RS19325 (CSB68_3879) | - | 3956882..3957442 (+) | 561 | WP_000258949.1 | TPM domain-containing protein | - |
| CSB68_RS19330 (CSB68_3880) | pilA | 3957786..3958247 (+) | 462 | WP_000993718.1 | pilin | Machinery gene |
| CSB68_RS19335 (CSB68_3881) | - | 3958489..3960117 (+) | 1629 | WP_001195771.1 | PglL family O-oligosaccharyltransferase | - |
| CSB68_RS19340 (CSB68_3882) | bfr | 3960158..3960622 (-) | 465 | WP_000678123.1 | bacterioferritin | - |
| CSB68_RS19345 (CSB68_3883) | - | 3960867..3961061 (-) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| CSB68_RS19350 (CSB68_3884) | - | 3961271..3961654 (-) | 384 | WP_000090000.1 | RidA family protein | - |
Sequence
Protein
Download Length: 153 a.a. Molecular weight: 15449.52 Da Isoelectric Point: 4.9218
>NTDB_id=275590 CSB68_RS19330 WP_000993718.1 3957786..3958247(+) (pilA) [Acinetobacter baumannii strain AR_0052]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYVARSQATAGYSEISNMRTGYDTELNDGTAITSLSQVGFTATSSGACS
AIGVTNFGNDGAATNAITCTLKGNPKIAGKIISLSRSATGAWTCSTDIATTDEFLPKGCTGGGTPAVGAITTL
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYVARSQATAGYSEISNMRTGYDTELNDGTAITSLSQVGFTATSSGACS
AIGVTNFGNDGAATNAITCTLKGNPKIAGKIISLSRSATGAWTCSTDIATTDEFLPKGCTGGGTPAVGAITTL
Nucleotide
Download Length: 462 bp
>NTDB_id=275590 CSB68_RS19330 WP_000993718.1 3957786..3958247(+) (pilA) [Acinetobacter baumannii strain AR_0052]
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATTGGTATTTTGGCTGCGATTGCGAT
TCCTGCTTATCAAAATTATGTAGCTCGTTCTCAGGCTACAGCTGGATATTCTGAAATTAGTAACATGCGTACGGGTTACG
ACACCGAATTAAATGATGGTACAGCGATTACCTCTCTTTCTCAAGTTGGCTTTACTGCGACTTCATCTGGCGCATGTTCA
GCCATAGGTGTTACAAATTTTGGTAACGATGGCGCAGCTACTAACGCTATTACGTGTACTTTAAAAGGAAATCCAAAAAT
CGCTGGAAAGATTATTTCACTTTCACGTTCAGCGACCGGTGCATGGACTTGTAGTACAGATATTGCCACTACTGACGAAT
TCTTACCAAAAGGATGTACGGGTGGTGGAACACCAGCCGTTGGTGCAATTACTACTTTGTAA
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATTGGTATTTTGGCTGCGATTGCGAT
TCCTGCTTATCAAAATTATGTAGCTCGTTCTCAGGCTACAGCTGGATATTCTGAAATTAGTAACATGCGTACGGGTTACG
ACACCGAATTAAATGATGGTACAGCGATTACCTCTCTTTCTCAAGTTGGCTTTACTGCGACTTCATCTGGCGCATGTTCA
GCCATAGGTGTTACAAATTTTGGTAACGATGGCGCAGCTACTAACGCTATTACGTGTACTTTAAAAGGAAATCCAAAAAT
CGCTGGAAAGATTATTTCACTTTCACGTTCAGCGACCGGTGCATGGACTTGTAGTACAGATATTGCCACTACTGACGAAT
TCTTACCAAAAGGATGTACGGGTGGTGGAACACCAGCCGTTGGTGCAATTACTACTTTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
64.286 |
100 |
0.647 |
| pilA | Pseudomonas aeruginosa PAK |
43.709 |
98.693 |
0.431 |
| pilA | Vibrio cholerae strain A1552 |
42.581 |
100 |
0.431 |
| pilA | Vibrio cholerae C6706 |
42.581 |
100 |
0.431 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
42.581 |
100 |
0.431 |
| comP | Acinetobacter baylyi ADP1 |
39.744 |
100 |
0.405 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
43.357 |
93.464 |
0.405 |