Detailed information NTG0274669

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: C5Y82_RS16000
• Genome accession: NZ_CP027034
• Coordinates: 3105243..3105839 (+)
• Length: 198 a.a.
• NCBI ID: WP_007500118.1
• Uniprot ID: -
• Organism: Bacillus pumilus strain 150a
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3100243..3110839

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C5Y82_RS15970 (C5Y82_15970)	-	3100642..3101997 (+)	1356	WP_119125409.1	IS1182-like element ISBpu1 family transposase	-
C5Y82_RS15975 (C5Y82_15975)	-	3102080..3103249 (-)	1170	WP_119125410.1	macrolide family glycosyltransferase	-
C5Y82_RS15980 (C5Y82_15980)	-	3103493..3104044 (-)	552	WP_012011343.1	hypothetical protein	-
C5Y82_RS15995 (C5Y82_15995)	-	3104712..3104990 (-)	279	WP_222434095.1	TM2 domain-containing protein	-
C5Y82_RS16000 (C5Y82_16000)	clpP	3105243..3105839 (+)	597	WP_007500118.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
C5Y82_RS16005 (C5Y82_16005)	-	3105899..3106477 (-)	579	WP_041815945.1	TIGR00730 family Rossman fold protein	-
C5Y82_RS16010 (C5Y82_16010)	-	3106615..3106944 (+)	330	WP_012011348.1	MazG-like family protein	-
C5Y82_RS16015 (C5Y82_16015)	-	3106973..3108595 (-)	1623	WP_119125412.1	SulP family inorganic anion transporter	-
C5Y82_RS16020 (C5Y82_16020)	-	3108633..3109214 (-)	582	WP_119125413.1	carbonic anhydrase	-
C5Y82_RS16025 (C5Y82_16025)	-	3109767..3110744 (+)	978	WP_119125414.1	D-glycerate dehydrogenase	-

Sequence

Protein

• Length: 198 a.a.
• Molecular weight: 21846.03 Da
• Isoelectric Point: 4.6905

>NTDB_id=274669 C5Y82_RS16000 WP_007500118.1 3105243..3105839(+) (clpP) [Bacillus pumilus strain 150a]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLAERTGQ
PIEVIERDTDRDNFKTAEEALQYGLIDKVLTRNTEEQK

Nucleotide

• Length: 597 bp

>NTDB_id=274669 C5Y82_RS16000 WP_007500118.1 3105243..3105839(+) (clpP) [Bacillus pumilus strain 150a]
ATGAATTTAATACCTACAGTCATTGAACAAACAAATCGTGGGGAAAGAGCTTACGACATTTATTCTCGTCTTTTAAAAGA
CCGTATTATCATGCTTGGTTCTGCGATCGATGACAATGTTGCCAACTCCATCGTGTCACAGCTGCTTTTCTTAGAAGCTG
AAGATCCAGAAAAAGATATTTCTATCTACATTAACAGCCCTGGCGGTTCAATCACAGCTGGTATGGCCATTTACGATACG
ATGCAATTTATTAAACCAAAGGTATCAACCATTTGTATTGGTATGGCTGCATCTATGGGTGCGTTCCTGCTTGCTGCTGG
TGAAAAAGGTAAGCGTTATGCCCTTCCAAACAGTGAAGTCATGATTCACCAACCACTAGGTGGTGCCCAAGGTCAAGCAA
CAGAAATTGAAATTGCGGCAAAACGAATCCTTTCTTTACGCGATAAACTGAACCAAGTACTTGCTGAACGTACTGGTCAG
CCAATTGAAGTCATTGAGCGCGATACAGATCGTGACAACTTCAAAACAGCGGAAGAAGCACTTCAATACGGACTCATTGA
CAAAGTCTTGACCCGTAATACAGAAGAACAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	93.434	100	0.934
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.539	96.465	0.652
clpP	Streptococcus thermophilus LMG 18311	58.549	97.475	0.571
clpP	Streptococcus thermophilus LMD-9	58.549	97.475	0.571
clpP	Lactococcus lactis subsp. cremoris KW2	56.186	97.98	0.551
clpP	Streptococcus pneumoniae Rx1	55.67	97.98	0.545
clpP	Streptococcus pneumoniae D39	55.67	97.98	0.545
clpP	Streptococcus pneumoniae R6	55.67	97.98	0.545
clpP	Streptococcus pneumoniae TIGR4	55.67	97.98	0.545
clpP	Streptococcus pyogenes JRS4	55.44	97.475	0.54
clpP	Streptococcus pyogenes MGAS315	55.44	97.475	0.54
clpP	Streptococcus mutans UA159	54.639	97.98	0.535
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	54.124	97.98	0.53