Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | C3Y97_RS13520 | Genome accession | NZ_CP026607 |
| Coordinates | 2652872..2653453 (-) | Length | 193 a.a. |
| NCBI ID | WP_000991610.1 | Uniprot ID | A0A9W5QF48 |
| Organism | Bacillus sp. DU-106 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2647872..2658453
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C3Y97_RS13485 (C3Y97_13840) | - | 2647883..2648698 (-) | 816 | WP_136363737.1 | PP2C family serine/threonine-protein phosphatase | - |
| C3Y97_RS13490 (C3Y97_13845) | - | 2648685..2648995 (-) | 311 | Protein_2571 | hypothetical protein | - |
| C3Y97_RS13495 (C3Y97_13850) | - | 2649087..2649254 (-) | 168 | WP_000508397.1 | hypothetical protein | - |
| C3Y97_RS13500 | - | 2649472..2649708 (+) | 237 | WP_000283219.1 | hypothetical protein | - |
| C3Y97_RS13505 (C3Y97_13860) | - | 2649762..2650598 (-) | 837 | WP_001084759.1 | proline/glycine betaine ABC transporter permease | - |
| C3Y97_RS13510 (C3Y97_13865) | - | 2650591..2651796 (-) | 1206 | WP_000370606.1 | glycine betaine/L-proline ABC transporter ATP-binding protein | - |
| C3Y97_RS13515 (C3Y97_13870) | - | 2651968..2652825 (+) | 858 | WP_136363457.1 | glycine betaine ABC transporter substrate-binding protein | - |
| C3Y97_RS13520 (C3Y97_13875) | clpP | 2652872..2653453 (-) | 582 | WP_000991610.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| C3Y97_RS13525 (C3Y97_13880) | - | 2653475..2654161 (-) | 687 | WP_000337507.1 | RNA polymerase subunit sigma-70 | - |
| C3Y97_RS13530 (C3Y97_13885) | - | 2654304..2654624 (+) | 321 | WP_001125388.1 | 2Fe-2S iron-sulfur cluster-binding protein | - |
| C3Y97_RS13535 (C3Y97_13890) | rpiA | 2654629..2655291 (+) | 663 | WP_001049982.1 | ribose 5-phosphate isomerase A | - |
| C3Y97_RS13540 (C3Y97_13895) | - | 2655403..2655837 (+) | 435 | WP_136363458.1 | GNAT family N-acetyltransferase | - |
| C3Y97_RS13545 (C3Y97_13900) | - | 2655963..2657330 (-) | 1368 | WP_001065145.1 | lytic polysaccharide monooxygenase | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21192.45 Da Isoelectric Point: 5.0776
>NTDB_id=270650 C3Y97_RS13520 WP_000991610.1 2652872..2653453(-) (clpP) [Bacillus sp. DU-106]
MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKAYGIVDDVVTKK
MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKAYGIVDDVVTKK
Nucleotide
Download Length: 582 bp
>NTDB_id=270650 C3Y97_RS13520 WP_000991610.1 2652872..2653453(-) (clpP) [Bacillus sp. DU-106]
ATGAATGCAATTCCATATGTAGTGGAACAAACGAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTAAAAGA
TCGTATTATTATTATCGGTTCAGAAATAAATGATCAAGTAGCGAGTAGTGTCGTAGCTCAATTATTATTTTTAGAAGCAG
AAGATGCAGAGAAAGATATATTTTTATACATTAATAGCCCCGGCGGATCAACGACAGCGGGATTTGCTATATTAGATACA
ATGAATTTAATTAAACCAGATGTGCAAACGCTGTGCATGGGCTTTGCGGCATCATTTGGTGCATTGCTATTATTATCTGG
AGCAAAAGGAAAACGGTTTGCGCTCCCTAACAGTGAAATTATGATTCATCAGCCGCTTGGTGGTGCACAAGGGCAAGCAA
CAGAAATTGAAATAACTGCGAAGAGAATATTAAAGTTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACGGGGCAA
CCGATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACCGCAGAAGAAGCAAAGGCATATGGGATTGTAGA
TGATGTTGTTACGAAAAAATAA
ATGAATGCAATTCCATATGTAGTGGAACAAACGAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTAAAAGA
TCGTATTATTATTATCGGTTCAGAAATAAATGATCAAGTAGCGAGTAGTGTCGTAGCTCAATTATTATTTTTAGAAGCAG
AAGATGCAGAGAAAGATATATTTTTATACATTAATAGCCCCGGCGGATCAACGACAGCGGGATTTGCTATATTAGATACA
ATGAATTTAATTAAACCAGATGTGCAAACGCTGTGCATGGGCTTTGCGGCATCATTTGGTGCATTGCTATTATTATCTGG
AGCAAAAGGAAAACGGTTTGCGCTCCCTAACAGTGAAATTATGATTCATCAGCCGCTTGGTGGTGCACAAGGGCAAGCAA
CAGAAATTGAAATAACTGCGAAGAGAATATTAAAGTTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACGGGGCAA
CCGATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACCGCAGAAGAAGCAAAGGCATATGGGATTGTAGA
TGATGTTGTTACGAAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
68.586 |
98.964 |
0.679 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.196 |
97.927 |
0.658 |
| clpP | Streptococcus pyogenes JRS4 |
56.085 |
97.927 |
0.549 |
| clpP | Streptococcus pyogenes MGAS315 |
56.085 |
97.927 |
0.549 |
| clpP | Streptococcus pneumoniae R6 |
55.208 |
99.482 |
0.549 |
| clpP | Streptococcus pneumoniae TIGR4 |
55.208 |
99.482 |
0.549 |
| clpP | Streptococcus pneumoniae Rx1 |
55.208 |
99.482 |
0.549 |
| clpP | Streptococcus thermophilus LMG 18311 |
55.208 |
99.482 |
0.549 |
| clpP | Streptococcus thermophilus LMD-9 |
55.208 |
99.482 |
0.549 |
| clpP | Streptococcus pneumoniae D39 |
55.208 |
99.482 |
0.549 |
| clpP | Streptococcus mutans UA159 |
53.968 |
97.927 |
0.528 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
52.381 |
97.927 |
0.513 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.265 |
97.927 |
0.492 |