Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   DZL40_RS07900 Genome accession   NZ_CP031639
Coordinates   1560429..1560980 (-) Length   183 a.a.
NCBI ID   WP_076638078.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain MGAS7914     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1555429..1565980
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DZL40_RS07865 (DZL40_07855) - 1555432..1556175 (-) 744 WP_021340917.1 class I SAM-dependent methyltransferase -
  DZL40_RS07870 (DZL40_07860) rsfS 1556223..1556576 (-) 354 WP_032459751.1 ribosome silencing factor -
  DZL40_RS07875 (DZL40_07865) yqeK 1556600..1557193 (-) 594 WP_002985989.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  DZL40_RS07880 (DZL40_07870) - 1557190..1557822 (-) 633 WP_002991091.1 nicotinate-nucleotide adenylyltransferase -
  DZL40_RS07885 (DZL40_07875) yhbY 1557891..1558199 (-) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  DZL40_RS07890 (DZL40_07880) yqeH 1558225..1559343 (-) 1119 WP_002985994.1 ribosome biogenesis GTPase YqeH -
  DZL40_RS07895 (DZL40_07885) - 1559343..1559870 (-) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  DZL40_RS07900 (DZL40_07890) comX/sigX/comX2/sigX2 1560429..1560980 (-) 552 WP_076638078.1 competence protein ComX Regulator

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22228.03 Da        Isoelectric Point: 9.8369

>NTDB_id=268589 DZL40_RS07900 WP_076638078.1 1560429..1560980(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain MGAS7914]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLCRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=268589 DZL40_RS07900 WP_076638078.1 1560429..1560980(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain MGAS7914]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTATGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.