Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | C2E56_RS08495 | Genome accession | NZ_CP026084 |
| Coordinates | 1654693..1655283 (-) | Length | 196 a.a. |
| NCBI ID | WP_000613483.1 | Uniprot ID | A0AAV3JHA0 |
| Organism | Streptococcus agalactiae strain NJ1606 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1649693..1660283
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2E56_RS08470 (C2E56_08775) | - | 1650330..1651094 (-) | 765 | WP_001185985.1 | ABC transporter ATP-binding protein | - |
| C2E56_RS08475 (C2E56_08780) | - | 1651095..1652048 (-) | 954 | WP_161508540.1 | branched-chain amino acid ABC transporter permease | - |
| C2E56_RS08480 (C2E56_08785) | - | 1652051..1652920 (-) | 870 | WP_000941400.1 | branched-chain amino acid ABC transporter permease | - |
| C2E56_RS08485 (C2E56_08790) | - | 1653027..1654193 (-) | 1167 | WP_000415517.1 | ABC transporter substrate-binding protein | - |
| C2E56_RS08490 (C2E56_08795) | - | 1654348..1654593 (-) | 246 | WP_001041186.1 | DUF2129 domain-containing protein | - |
| C2E56_RS08495 (C2E56_08800) | clpP | 1654693..1655283 (-) | 591 | WP_000613483.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| C2E56_RS08500 (C2E56_08805) | upp | 1655408..1656037 (-) | 630 | WP_000514490.1 | uracil phosphoribosyltransferase | - |
| C2E56_RS08505 (C2E56_08810) | - | 1656147..1657316 (-) | 1170 | WP_000634082.1 | MalY/PatB family protein | - |
| C2E56_RS08510 (C2E56_08815) | - | 1657452..1658000 (-) | 549 | WP_001019794.1 | tRNA (cytidine(34)-2'-O)-methyltransferase | - |
| C2E56_RS08515 (C2E56_08820) | - | 1658173..1659525 (-) | 1353 | WP_000427468.1 | APC family permease | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21550.52 Da Isoelectric Point: 4.5933
>NTDB_id=266964 C2E56_RS08495 WP_000613483.1 1654693..1655283(-) (clpP) [Streptococcus agalactiae strain NJ1606]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGQVEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQSDMAIAAEHLLKTRHTLEKILADNSGQ
SIEKVHDDAERDRWMSAQETLDYGFIDAIMENNNLQ
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGQVEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQSDMAIAAEHLLKTRHTLEKILADNSGQ
SIEKVHDDAERDRWMSAQETLDYGFIDAIMENNNLQ
Nucleotide
Download Length: 591 bp
>NTDB_id=266964 C2E56_RS08495 WP_000613483.1 1654693..1655283(-) (clpP) [Streptococcus agalactiae strain NJ1606]
ATGATTCCAGTAGTTATTGAACAAACAAGTCGTGGTGAACGCTCTTATGATATTTACTCACGTCTTTTAAAAGATCGTAT
TATTATGTTGACAGGCCAAGTTGAGGATAATATGGCTAATAGTATCATTGCACAGTTATTGTTTCTCGATGCACAAGATA
ATACAAAGGACATTTACCTTTATGTCAATACACCGGGTGGTTCAGTATCGGCTGGACTTGCTATTGTGGATACCATGAAC
TTCATTAAATCGGACGTACAGACGATTGTTATGGGGATGGCTGCTTCGATGGGAACCATTATTGCTTCGAGTGGTGCTAA
AGGAAAACGTTTTATGTTACCGAATGCAGAATATATGATCCACCAACCAATGGGCGGAACAGGCGGAGGCACACAGCAAT
CTGATATGGCTATTGCTGCTGAGCATCTTTTAAAAACGCGTCATACTTTAGAAAAAATCTTAGCTGATAATTCTGGTCAA
TCTATTGAAAAAGTCCATGATGATGCAGAGCGTGATCGTTGGATGAGTGCTCAAGAAACACTTGATTATGGCTTTATTGA
TGCTATTATGGAAAATAATAATCTGCAATAA
ATGATTCCAGTAGTTATTGAACAAACAAGTCGTGGTGAACGCTCTTATGATATTTACTCACGTCTTTTAAAAGATCGTAT
TATTATGTTGACAGGCCAAGTTGAGGATAATATGGCTAATAGTATCATTGCACAGTTATTGTTTCTCGATGCACAAGATA
ATACAAAGGACATTTACCTTTATGTCAATACACCGGGTGGTTCAGTATCGGCTGGACTTGCTATTGTGGATACCATGAAC
TTCATTAAATCGGACGTACAGACGATTGTTATGGGGATGGCTGCTTCGATGGGAACCATTATTGCTTCGAGTGGTGCTAA
AGGAAAACGTTTTATGTTACCGAATGCAGAATATATGATCCACCAACCAATGGGCGGAACAGGCGGAGGCACACAGCAAT
CTGATATGGCTATTGCTGCTGAGCATCTTTTAAAAACGCGTCATACTTTAGAAAAAATCTTAGCTGATAATTCTGGTCAA
TCTATTGAAAAAGTCCATGATGATGCAGAGCGTGATCGTTGGATGAGTGCTCAAGAAACACTTGATTATGGCTTTATTGA
TGCTATTATGGAAAATAATAATCTGCAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus thermophilus LMG 18311 |
92.347 |
100 |
0.923 |
| clpP | Streptococcus thermophilus LMD-9 |
92.347 |
100 |
0.923 |
| clpP | Streptococcus pneumoniae Rx1 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae D39 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae R6 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae TIGR4 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pyogenes JRS4 |
89.286 |
100 |
0.893 |
| clpP | Streptococcus pyogenes MGAS315 |
89.286 |
100 |
0.893 |
| clpP | Streptococcus mutans UA159 |
88.776 |
100 |
0.888 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
85.204 |
100 |
0.852 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
84.694 |
100 |
0.847 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
58.031 |
98.469 |
0.571 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
57.895 |
96.939 |
0.561 |