Detailed information
Bioinformatically predicted
Overview
| Name | comA | Type | Regulator |
| Locus tag | STER_RS11560 | Genome accession | NC_008532 |
| Coordinates | 274349..274558 (+) | Length | 69 a.a. |
| NCBI ID | WP_002946147.1 | Uniprot ID | - |
| Organism | Streptococcus thermophilus LMD-9 | ||
| Function | processing and transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 269349..279558
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| STER_RS01520 (STER_0313) | - | 269758..270297 (+) | 540 | WP_372585740.1 | tRNA (cytidine(34)-2'-O)-methyltransferase | - |
| STER_RS01525 (STER_0314) | - | 270608..271165 (+) | 558 | WP_011680718.1 | ECF transporter S component | - |
| STER_RS01530 (STER_0315) | - | 271168..271818 (+) | 651 | WP_011680719.1 | phosphatase PAP2 family protein | - |
| STER_RS01535 (STER_0316) | comR | 272013..272912 (+) | 900 | WP_011680720.1 | helix-turn-helix domain-containing protein | Regulator |
| - | comS | 273000..273071 (+) | 72 | - | - | Regulator |
| STER_RS11550 | - | 273150..273731 (+) | 582 | Protein_243 | cysteine peptidase family C39 domain-containing protein | - |
| STER_RS11555 | comA | 273716..274006 (+) | 291 | WP_194238295.1 | ABC transporter transmembrane domain-containing protein | Regulator |
| STER_RS11560 | comA | 274349..274558 (+) | 210 | WP_002946147.1 | hypothetical protein | Regulator |
| STER_RS01555 (STER_0318) | - | 274613..275181 (+) | 569 | Protein_246 | ATP-binding cassette domain-containing protein | - |
| STER_RS11565 (STER_0319) | - | 275412..275600 (+) | 189 | WP_224103239.1 | DUF805 domain-containing protein | - |
| STER_RS11575 (STER_0320) | - | 276093..276395 (-) | 303 | WP_224103194.1 | hypothetical protein | - |
| STER_RS11580 (STER_0321) | - | 276619..276990 (-) | 372 | WP_224103195.1 | hypothetical protein | - |
| STER_RS01570 (STER_0322) | - | 277396..277911 (+) | 516 | WP_002949547.1 | AmiS/UreI family transporter | - |
| STER_RS01575 (STER_0323) | - | 277936..278238 (+) | 303 | WP_002886558.1 | urease subunit gamma | - |
| STER_RS01580 (STER_0324) | - | 278250..278561 (+) | 312 | WP_002886559.1 | urease subunit beta | - |
Sequence
Protein
Download Length: 69 a.a. Molecular weight: 8157.54 Da Isoelectric Point: 9.7339
>NTDB_id=26679 STER_RS11560 WP_002946147.1 274349..274558(+) (comA) [Streptococcus thermophilus LMD-9]
MITYSMLLNYFTTPLINIIYLQSKIQQAKVANNCLQEVYVVNKEEKGQLKDLSFKQLDLKGVSHRFRYQ
MITYSMLLNYFTTPLINIIYLQSKIQQAKVANNCLQEVYVVNKEEKGQLKDLSFKQLDLKGVSHRFRYQ
Nucleotide
Download Length: 210 bp
>NTDB_id=26679 STER_RS11560 WP_002946147.1 274349..274558(+) (comA) [Streptococcus thermophilus LMD-9]
TTGATTACCTATAGTATGTTGCTTAATTATTTTACGACTCCTTTAATTAATATTATCTATCTTCAATCTAAGATTCAGCA
AGCCAAGGTAGCCAATAATTGTCTTCAAGAAGTTTATGTTGTGAATAAGGAAGAAAAAGGTCAACTCAAAGATTTATCCT
TTAAACAATTAGACTTAAAAGGTGTTAGTCATCGTTTCAGATACCAATAA
TTGATTACCTATAGTATGTTGCTTAATTATTTTACGACTCCTTTAATTAATATTATCTATCTTCAATCTAAGATTCAGCA
AGCCAAGGTAGCCAATAATTGTCTTCAAGAAGTTTATGTTGTGAATAAGGAAGAAAAAGGTCAACTCAAAGATTTATCCT
TTAAACAATTAGACTTAAAAGGTGTTAGTCATCGTTTCAGATACCAATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comA | Streptococcus gordonii str. Challis substr. CH1 |
54.167 |
100 |
0.565 |
| comA | Streptococcus mitis NCTC 12261 |
52.778 |
100 |
0.551 |
| comA | Streptococcus pneumoniae Rx1 |
51.389 |
100 |
0.536 |
| comA | Streptococcus pneumoniae D39 |
51.389 |
100 |
0.536 |
| comA | Streptococcus pneumoniae R6 |
51.389 |
100 |
0.536 |
| comA | Streptococcus pneumoniae TIGR4 |
51.389 |
100 |
0.536 |
| comA | Streptococcus mitis SK321 |
50 |
100 |
0.522 |
| comA/nlmT | Streptococcus mutans UA159 |
44.286 |
100 |
0.449 |